RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 CTAGE3PQ8IX95 158 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 MARCH10Q8NA82 808 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-226ENST00000556825 PNPT1Q8TCS8 783 aaKnown RBP14.05□□□□□ -0.16
SHMT2-226ENST00000556825 KLHL32Q96NJ5 620 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 BEGAINQ9BUH8 593 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 SEMA6AQ9H2E6 1030 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 SIRPGQ9P1W8 387 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 DGKBQ9Y6T7 804 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 TIAM2Q8IVF5 1701 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 ATF7P17544 494 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-226ENST00000556825 MX2P20592 715 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 CD40LGP29965 261 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 NPTX2P47972 431 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 MS4A2Q01362 244 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 SP140Q13342 867 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 CHI3L2Q15782 390 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 TOR2AQ5JU69 321 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 SYCE2Q6PIF2 218 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 C16orf89Q6UX73 402 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 PRR23BQ6ZRT6 265 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 BEND5Q7L4P6 421 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 FBXO11Q86XK2 927 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 HID1Q8IV36 788 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 CCNYL1Q8N7R7 359 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 TMEM35BQ8NCS4 154 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 OR7D4Q8NG98 312 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 FANK1Q8TC84 345 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 SLC5A5Q92911 643 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 NRBF2Q96F24 287 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 SERAC1Q96JX3 654 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 WACQ9BTA9 647 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 MAP3K20Q9NYL2 800 aaKnown RBP14.05□□□□□ -0.16
SHMT2-226ENST00000556825 KLF15Q9UIH9 416 aa14.05□□□□□ -0.16
SHMT2-226ENST00000556825 FAM205AQ6ZU69 1335 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 CNTNAP5Q8WYK1 1306 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 UBR2Q8IWV8 1755 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 AHDC1Q5TGY3 1603 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-226ENST00000556825 TRAV6A0A075B6T7 132 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 CCDC194A0A1B0GVG4 234 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 LEUTXA8MZ59 168 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 CTDSP2O14595 271 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 DNALI1O14645 258 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-226ENST00000556825 CDK14O94921 469 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 RETP07949 1114 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 SLC5A1P13866 664 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 PPP5CP53041 499 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 CASP7P55210 303 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 LLGL1Q15334 1064 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 PPP1R3AQ16821 1122 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 LRRC24Q50LG9 513 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 PIGGQ5H8A4 983 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 FAM182AQ5T1J6 154 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 STYK1Q6J9G0 422 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 USP37Q86T82 979 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 C12orf56Q8IXR9 622 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 OR2T3Q8NH03 318 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 LARP4BQ92615 738 aaKnown RBP14.04□□□□□ -0.16
SHMT2-226ENST00000556825 TWNKQ96RR1 684 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 YTHDF1Q9BYJ9 559 aaKnown RBP14.04□□□□□ -0.16
SHMT2-226ENST00000556825 ANO3Q9BYT9 981 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 ARMT1Q9H993 441 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 JMJD4Q9H9V9 463 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 FBXO40Q9UH90 709 aa14.04□□□□□ -0.16
SHMT2-226ENST00000556825 DENND3A2RUS2 1198 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 BCAS1O75363 584 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-226ENST00000556825 ZMPSTE24O75844 475 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 IL18RAPO95256 599 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 HMGN1P05114 100 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 KRT7P08729 469 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 ADORA1P30542 326 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 RPL9P32969 192 aaKnown RBP14.03□□□□□ -0.16
SHMT2-226ENST00000556825 GRIA1P42261 906 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 NDST1P52848 882 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 NME5P56597 212 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 Q5BKY6 102 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 DESI1Q6ICB0 168 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 C11orf96Q7Z7L8 435 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 SLCO6A1Q86UG4 719 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 WDR49Q8IV35 697 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 LYSMD2Q8IV50 215 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 CCDC103Q8IW40 242 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 SCML4Q8N228 414 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 IL17RDQ8NFM7 739 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 PLBD2Q8NHP8 589 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 TGFBRAP1Q8WUH2 860 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 GTF2H4Q92759 462 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 MECRQ9BV79 373 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 BTBD2Q9BX70 525 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 ACSS3Q9H6R3 686 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 ZC4H2Q9NQZ6 224 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 SEPT11Q9NVA2 429 aaKnown RBP14.03□□□□□ -0.16
SHMT2-226ENST00000556825 SYBUQ9NX95 663 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.03□□□□□ -0.16
SHMT2-226ENST00000556825 CPNE7Q9UBL6 633 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 TRPC5Q9UL62 973 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-226ENST00000556825 MN1Q10571 1320 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-226ENST00000556825 SERPINI2O75830 405 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 CIAO1O76071 339 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 TNKSO95271 1327 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 PTTG1O95997 202 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms