RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 MBD3L5A6NJ08 208 aaPredicted RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 STX16-NPEPL1H3BU86 382 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 CLIC1O00299 241 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 STX16O14662 325 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 HOXC11O43248 304 aaPredicted RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 HNRNPRO43390 633 aaKnown RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 GCATO75600 419 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 MT-CO3P00414 261 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 HNRNPCP07910 306 aaKnown RBP eCLIP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 CYP3A4P08684 503 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 CPA1P15085 419 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 DRD4P21917 467 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 DDIT3P35638 169 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 RCAN1P53805 252 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 FAM3BP58499 235 aaPredicted RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 CYP4F2P78329 520 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 RAE1P78406 368 aaKnown RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 SIM1P81133 766 aaPredicted RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 TLE3Q04726 772 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 AIMP1Q12904 312 aaKnown RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 PUM1Q14671 1186 aaKnown RBP eCLIP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 MFSD13AQ14CX5 517 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 CNGA3Q16281 694 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 ZXDCQ2QGD7 858 aaPredicted RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 LRRC24Q50LG9 513 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 RNASE12Q5GAN4 147 aaKnown RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 INTS11Q5TA45 600 aaKnown RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 CEP85Q6P2H3 762 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 ZNF790Q6PG37 636 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 TMEM65Q6PI78 240 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 SERPINA13PQ6UXR4 307 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 CENPQQ7L2Z9 268 aaPredicted RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 G2E3Q7L622 706 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 ZNF627Q7L945 461 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 RASGRP2Q7LDG7 609 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 UNC5CLQ8IV45 518 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 ANKRD44Q8N8A2 993 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 SIMC1Q8NDZ2 872 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 MAFAQ8NHW3 353 aaPredicted RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 EDC3Q96F86 508 aaKnown RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 RBM17Q96I25 401 aaKnown RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 MPP4Q96JB8 637 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 CCDC17Q96LX7 622 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 PPM1MQ96MI6 270 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 MMS19Q96T76 1030 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 PRRX2Q99811 253 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 THAP7Q9BT49 309 aaPredicted RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 TOR3AQ9H497 397 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 CDCP1Q9H5V8 836 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 RMI1Q9H9A7 625 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 PLEKHA2Q9HB19 425 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 WASH6PQ9NQA3 447 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 RASSF1Q9NS23 344 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 PACSIN3Q9UKS6 424 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 FZD4Q9ULV1 537 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 DNAJC16Q9Y2G8 782 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 HEMK1Q9Y5R4 338 aaPredicted RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 CICQ96RK0 1608 aaPredicted RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 ABCC4O15439 1325 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 AFF2P51816 1311 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 SOS1Q07889 1333 aaPredicted RBP4.63□□□□□ -1.67
TRAV15-201ENST00000556680 SPATA31A1Q5TZJ5 1347 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 RREB1Q92766 1687 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 A0A1B0GUL6 1792 aa4.63□□□□□ -1.67
TRAV15-201ENST00000556680 UBR3Q6ZT12 1888 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 SCN7AQ01118 1682 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 FAM90A20PA6NIJ5 464 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 SAC3D1A6NKF1 404 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 C3orf70A6NLC5 250 aaPredicted RBP4.62□□□□□ -1.67
TRAV15-201ENST00000556680 HMGB1P1B2RPK0 211 aaPredicted RBP4.62□□□□□ -1.67
TRAV15-201ENST00000556680 ERVV-2B6SEH9 535 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 EYA2O00167 538 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 TSPAN3O60637 253 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 RHOBTB3O94955 611 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 ALDOAP04075 364 aaKnown RBP4.62□□□□□ -1.67
TRAV15-201ENST00000556680 CYP21A2P08686 494 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 HOXB7P09629 217 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 ITPKBP27987 946 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 SLC8A1P32418 973 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 AGTR2P50052 363 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 TAS2R50P59544 299 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 HOXA4Q00056 320 aaPredicted RBP4.62□□□□□ -1.67
TRAV15-201ENST00000556680 CHRNDQ07001 517 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 MAPK7Q13164 816 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 ZNF484Q5JVG2 852 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 BCDIN3DQ7Z5W3 292 aaKnown RBP4.62□□□□□ -1.67
TRAV15-201ENST00000556680 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.62□□□□□ -1.67
TRAV15-201ENST00000556680 TMTC1Q8IUR5 882 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 C16orf71Q8IYS4 520 aaPredicted RBP4.62□□□□□ -1.67
TRAV15-201ENST00000556680 PTGR2Q8N8N7 351 aaPredicted RBP4.62□□□□□ -1.67
TRAV15-201ENST00000556680 USP38Q8NB14 1042 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 AKAP1Q92667 903 aaKnown RBP eCLIP4.62□□□□□ -1.67
TRAV15-201ENST00000556680 STAMQ92783 540 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 ARRDC3Q96B67 414 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 KTI12Q96EK9 354 aaPredicted RBP4.62□□□□□ -1.67
TRAV15-201ENST00000556680 TRMT61AQ96FX7 289 aaKnown RBP4.62□□□□□ -1.67
TRAV15-201ENST00000556680 TWNKQ96RR1 684 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 SLC26A6Q9BXS9 759 aa4.62□□□□□ -1.67
TRAV15-201ENST00000556680 RWDD1Q9H446 243 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms