RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 NIPA2Q8N8Q9 360 aa17.49■□□□□ 0.39
PSEN1-217ENST00000556533 ARHGEF2Q92974 986 aaKnown RBP17.49■□□□□ 0.39
PSEN1-217ENST00000556533 MAGEH1Q9H213 219 aa17.49■□□□□ 0.39
PSEN1-217ENST00000556533 HPCAL4Q9UM19 191 aa17.49■□□□□ 0.39
PSEN1-217ENST00000556533 SOWAHDA6NJG2 315 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 FGF10O15520 208 aaPredicted RBP17.48■□□□□ 0.39
PSEN1-217ENST00000556533 NDUFS2O75306 463 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 DNTTP04053 509 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 RARAP10276 462 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 SRCP12931 536 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 GOT1P17174 413 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 ETFBP38117 255 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 DHPSP49366 369 aaPredicted RBP17.48■□□□□ 0.39
PSEN1-217ENST00000556533 TPMTP51580 245 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 HADHQ16836 314 aaKnown RBP17.48■□□□□ 0.39
PSEN1-217ENST00000556533 ZNF776Q68DI1 518 aaPredicted RBP17.48■□□□□ 0.39
PSEN1-217ENST00000556533 TXNRD3NBQ6F5E7 133 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 RFX8Q6ZV50 586 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 ARMCX6Q7L4S7 300 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 TMTC1Q8IUR5 882 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 PSTKQ8IV42 348 aaKnown RBP17.48■□□□□ 0.39
PSEN1-217ENST00000556533 MMAAQ8IVH4 418 aaKnown RBP17.48■□□□□ 0.39
PSEN1-217ENST00000556533 SH2D3CQ8N5H7 860 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 PTPRN2Q92932 1015 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 ZC3H10Q96K80 434 aaKnown RBP17.48■□□□□ 0.39
PSEN1-217ENST00000556533 FBRSQ9HAH7 460 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 ITM2CQ9NQX7 267 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.48■□□□□ 0.39
PSEN1-217ENST00000556533 PCDHA13Q9Y5I0 950 aa17.48■□□□□ 0.39
PSEN1-217ENST00000556533 IGHV1OR15-9A0A0B4J2B8 117 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 EIF3CLB5ME19 914 aaKnown RBP17.47■□□□□ 0.39
PSEN1-217ENST00000556533 H3BRJ5 948 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 SMAD6O43541 496 aaKnown RBP17.47■□□□□ 0.39
PSEN1-217ENST00000556533 ATP9BO43861 1147 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 HTR7P34969 479 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 NOP2P46087 812 aaKnown RBP17.47■□□□□ 0.39
PSEN1-217ENST00000556533 PSMD8P48556 350 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 DNA2P51530 1060 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 RPL6Q02878 288 aaKnown RBP17.47■□□□□ 0.39
PSEN1-217ENST00000556533 KRT81Q14533 505 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 CCDC6Q16204 474 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 ZFYVE27Q5T4F4 411 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 SLC36A4Q6YBV0 504 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 Q6ZVU0 165 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 RHOT2Q8IXI1 618 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 NETO2Q8NC67 525 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 FRS2Q8WU20 508 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 CELF6Q96J87 481 aaKnown RBP17.47■□□□□ 0.39
PSEN1-217ENST00000556533 FAM129BQ96TA1 746 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 EIF3CQ99613 913 aaKnown RBP17.47■□□□□ 0.39
PSEN1-217ENST00000556533 ACE2Q9BYF1 805 aaPredicted RBP17.47■□□□□ 0.39
PSEN1-217ENST00000556533 RSPH9Q9H1X1 276 aaPredicted RBP17.47■□□□□ 0.39
PSEN1-217ENST00000556533 ARRDC1-AS1Q9H2J1 176 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 TNKS2Q9H2K2 1166 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 CWC15Q9P013 229 aaKnown RBP17.47■□□□□ 0.39
PSEN1-217ENST00000556533 IMPACTQ9P2X3 320 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 INTUQ9ULD6 942 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 TFR2Q9UP52 801 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 HS3ST2Q9Y278 367 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 ACTL7AQ9Y615 435 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 EPN1Q9Y6I3 576 aaPredicted RBP17.47■□□□□ 0.39
PSEN1-217ENST00000556533 VPS13AQ96RL7 3174 aa17.47■□□□□ 0.39
PSEN1-217ENST00000556533 WASH4PA8MWX3 477 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 GOLGA6L6A8MZA4 724 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 RASA4BC9J798 803 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 RASA4O43374 803 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 ZMPSTE24O75844 475 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 IL1BP01584 269 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 RETP07949 1114 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 ERCC2P18074 760 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 CD6P30203 668 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 ARL4AP40617 200 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 ARF5P84085 180 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 CREB5Q02930 508 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 SLC25A11Q02978 314 aaKnown RBP17.46■□□□□ 0.39
PSEN1-217ENST00000556533 PMS2CLQ68D20 193 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 METTL3Q86U44 580 aaKnown RBP17.46■□□□□ 0.39
PSEN1-217ENST00000556533 TEKT4Q8WW24 435 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 RFFLQ8WZ73 363 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 HMCESQ96FZ2 354 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 TOE1Q96GM8 510 aaKnown RBP17.46■□□□□ 0.39
PSEN1-217ENST00000556533 BAG1Q99933 345 aaPredicted RBP17.46■□□□□ 0.39
PSEN1-217ENST00000556533 NOL6Q9H6R4 1146 aaKnown RBP17.46■□□□□ 0.39
PSEN1-217ENST00000556533 LUC7LQ9NQ29 371 aaKnown RBP17.46■□□□□ 0.39
PSEN1-217ENST00000556533 DONSONQ9NYP3 566 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 LCMT1Q9UIC8 334 aa17.46■□□□□ 0.39
PSEN1-217ENST00000556533 MID1O15344 667 aa17.45■□□□□ 0.38
PSEN1-217ENST00000556533 BUB1O43683 1085 aa17.45■□□□□ 0.38
PSEN1-217ENST00000556533 KDELR3O43731 214 aa17.45■□□□□ 0.38
PSEN1-217ENST00000556533 NDUFA10O95299 355 aa17.45■□□□□ 0.38
PSEN1-217ENST00000556533 IPO7O95373 1038 aaKnown RBP17.45■□□□□ 0.38
PSEN1-217ENST00000556533 TNNT1P13805 278 aa17.45■□□□□ 0.38
PSEN1-217ENST00000556533 AMPD1P23109 780 aa17.45■□□□□ 0.38
PSEN1-217ENST00000556533 OXTRP30559 389 aa17.45■□□□□ 0.38
PSEN1-217ENST00000556533 SLC8A1P32418 973 aa17.45■□□□□ 0.38
PSEN1-217ENST00000556533 VASPP50552 380 aaPredicted RBP17.45■□□□□ 0.38
PSEN1-217ENST00000556533 CDH6P55285 790 aa17.45■□□□□ 0.38
PSEN1-217ENST00000556533 YBEYP58557 167 aaPredicted RBP17.45■□□□□ 0.38
PSEN1-217ENST00000556533 TAS2R40P59535 323 aa17.45■□□□□ 0.38
PSEN1-217ENST00000556533 SLC20A2Q08357 652 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms