RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ARFGEF1Q9Y6D6 1849 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 KDM3AQ9Y4C1 1321 aa5.46□□□□□ -1.54
SRP54-211ENST00000556445 BRCA1P38398 1863 aaKnown RBP5.45□□□□□ -1.54
SRP54-211ENST00000556445 A0A088AWK7 358 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 A0A1W2PPC4 97 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 TMEM232C9JQI7 657 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 RTCAO00442 366 aaKnown RBP5.45□□□□□ -1.54
SRP54-211ENST00000556445 IL18RAPO95256 599 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 NDUFB10O96000 172 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 SERPINC1P01008 464 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 PTGS2P35354 604 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 HOXD13P35453 343 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 ACTN2P35609 894 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 TNNT3P45378 269 aaPredicted RBP5.45□□□□□ -1.54
SRP54-211ENST00000556445 FLT3LGP49771 235 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 UBASH3AP57075 661 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 FAM189BP81408 668 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 MAPK7Q13164 816 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 MTA1Q13330 715 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 TRPC3Q13507 836 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 EFR3AQ14156 821 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 ERV3-1Q14264 604 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 CALCRLQ16602 461 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 TPD52L1Q16890 204 aaPredicted RBP5.45□□□□□ -1.54
SRP54-211ENST00000556445 QRICH1Q2TAL8 776 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 ARL13BQ3SXY8 428 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 FILIP1LQ4L180 1135 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 MUM1L1Q5H9M0 696 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 KRT79Q5XKE5 535 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 UNC5DQ6UXZ4 953 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 ZNF572Q7Z3I7 529 aaPredicted RBP5.45□□□□□ -1.54
SRP54-211ENST00000556445 ULK2Q8IYT8 1036 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 NAT8LQ8N9F0 302 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 ERMNQ8TAM6 284 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 SLC35B2Q8TB61 432 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 SPPL3Q8TCT6 385 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 LPAR1Q92633 364 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 HAS1Q92839 578 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 ATP2A3Q93084 1043 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 C18orf8Q96DM3 657 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 EPSTI1Q96J88 318 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 NT5C3AQ9H0P0 336 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 VCPKMTQ9H867 229 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 TRPV4Q9HBA0 871 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 SPON1Q9HCB6 807 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 PNPLA8Q9NP80 782 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 MYOZ2Q9NPC6 264 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 RBM12Q9NTZ6 932 aaKnown RBP5.45□□□□□ -1.54
SRP54-211ENST00000556445 DCAF16Q9NXF7 216 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 KIF17Q9P2E2 1029 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 MTRRQ9UBK8 725 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 TBK1Q9UHD2 729 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 VPS28Q9UK41 221 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 FEM1BQ9UK73 627 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 MAN1B1Q9UKM7 699 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 C19orf53Q9UNZ5 99 aaPredicted RBP5.45□□□□□ -1.54
SRP54-211ENST00000556445 FZD1Q9UP38 647 aa5.45□□□□□ -1.54
SRP54-211ENST00000556445 MRPL11Q9Y3B7 192 aaKnown RBP5.45□□□□□ -1.54
SRP54-211ENST00000556445 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.45□□□□□ -1.54
SRP54-211ENST00000556445 CYP3A7-CYP3A51PA0A087WV96 503 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 CLRN2A0PK11 232 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 PI4K2BG5E9Z4 385 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 TRIM38O00635 465 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 CCP110O43303 1012 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 RECQL4O94761 1208 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 KIF20AO95235 890 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 TUBB4AP04350 444 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 ALOX15P16050 662 aaPredicted RBP5.44□□□□□ -1.54
SRP54-211ENST00000556445 CYP3A7P24462 503 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 EDNRBP24530 442 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 EEF1GP26641 437 aaKnown RBP5.44□□□□□ -1.54
SRP54-211ENST00000556445 ECHS1P30084 290 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 HPDP32754 393 aaPredicted RBP5.44□□□□□ -1.54
SRP54-211ENST00000556445 SLC16A2P36021 539 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 SREBF1P36956 1147 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 SLC5A3P53794 718 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 MALLQ13021 153 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 ZNF658Q5TYW1 1059 aaPredicted RBP5.44□□□□□ -1.54
SRP54-211ENST00000556445 MBNL2Q5VZF2 373 aaKnown RBP5.44□□□□□ -1.54
SRP54-211ENST00000556445 METRNLQ641Q3 311 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 ISM2Q6H9L7 571 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 TANGO2Q6ICL3 276 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 PCSK4Q6UW60 755 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 APOBEC3FQ8IUX4 373 aaKnown RBP5.44□□□□□ -1.54
SRP54-211ENST00000556445 SAMD14Q8IZD0 417 aaPredicted RBP5.44□□□□□ -1.54
SRP54-211ENST00000556445 RNF169Q8NCN4 708 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 CCDC112Q8NEF3 446 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 NOC3LQ8WTT2 800 aaKnown RBP5.44□□□□□ -1.54
SRP54-211ENST00000556445 CHFRQ96EP1 664 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 GPATCH1Q9BRR8 931 aaKnown RBP5.44□□□□□ -1.54
SRP54-211ENST00000556445 MLST8Q9BVC4 326 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 SLC46A2Q9BY10 475 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 IKZF4Q9H2S9 585 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 CYP4F11Q9HBI6 524 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 RRAGDQ9NQL2 400 aaPredicted RBP5.44□□□□□ -1.54
SRP54-211ENST00000556445 HAUS2Q9NVX0 235 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 LRWD1Q9UFC0 647 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 DDX25Q9UHL0 483 aaKnown RBP5.44□□□□□ -1.54
SRP54-211ENST00000556445 ZNF711Q9Y462 761 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 CEP83Q9Y592 693 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms