RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CHRNA5P30532 468 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 HOXA11P31270 313 aaPredicted RBP5.57□□□□□ -1.52
PRPF39-209ENST00000556353 ADPRHP54922 357 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 FAM3BP58499 235 aaPredicted RBP5.57□□□□□ -1.52
PRPF39-209ENST00000556353 BTKQ06187 659 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 ASIC2Q16515 512 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 ARL13AQ5H913 290 aaPredicted RBP5.57□□□□□ -1.52
PRPF39-209ENST00000556353 RTL10Q7L3V2 364 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 SGCZQ96LD1 299 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.57□□□□□ -1.52
PRPF39-209ENST00000556353 FNIP2Q9P278 1114 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 FBXO4Q9UKT5 387 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 STRCP1A6NGW2 1772 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 CAMSAP2Q08AD1 1489 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 NCOA1Q15788 1441 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 UHRF1BP1Q6BDS2 1440 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 KIAA1107Q9UPP5 1409 aa5.57□□□□□ -1.52
PRPF39-209ENST00000556353 DNMT1P26358 1616 aaKnown RBP5.56□□□□□ -1.52
PRPF39-209ENST00000556353 ZNF644Q9H582 1327 aaPredicted RBP5.56□□□□□ -1.52
PRPF39-209ENST00000556353 ARHGEF5Q12774 1597 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 ASNA1O43681 348 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 LARGE1O95461 756 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 PLA2G2AP14555 144 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 TNFRSF8P28908 595 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 RASSF2P50749 326 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 NEK3P51956 506 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 ROR2Q01974 943 aaKnown RBP5.56□□□□□ -1.52
PRPF39-209ENST00000556353 EGR4Q05215 589 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 SF3A3Q12874 501 aaKnown RBP eCLIP5.56□□□□□ -1.529e-11■□□□□ 9.8
PRPF39-209ENST00000556353 STARD3Q14849 445 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 HSP90AB2PQ58FF8 381 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 C18orf65Q6ZTR6 163 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 CTU1Q7Z7A3 348 aaKnown RBP5.56□□□□□ -1.52
PRPF39-209ENST00000556353 SRLQ86TD4 932 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 KLBQ86Z14 1044 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 SPATA2LQ8IUW3 424 aaPredicted RBP5.56□□□□□ -1.52
PRPF39-209ENST00000556353 SLC25A41Q8N5S1 370 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 NEUROG1Q92886 237 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 MECRQ9BV79 373 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 SORBS1Q9BX66 1292 aaKnown RBP5.56□□□□□ -1.52
PRPF39-209ENST00000556353 KRCC1Q9NPI7 259 aaPredicted RBP5.56□□□□□ -1.52
PRPF39-209ENST00000556353 RNF146Q9NTX7 359 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 MYO6Q9UM54 1294 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 A2MP01023 1474 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 NCOA2Q15596 1464 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 PTPRKQ15262 1439 aa5.56□□□□□ -1.52
PRPF39-209ENST00000556353 CYP1A2P05177 515 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 ENTPD1P49961 510 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 LTBQ06643 244 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 SLC16A12Q6ZSM3 486 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 Q6ZTK2 550 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 IGFN1Q86VF2 1251 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 FAM186BQ8IYM0 893 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 RBMXL3Q8N7X1 1067 aaKnown RBP5.55□□□□□ -1.52
PRPF39-209ENST00000556353 CLEC4CQ8WTT0 213 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 HMGB4Q8WW32 186 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 MED30Q96HR3 178 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 PCGF6Q9BYE7 350 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 MAGEH1Q9H213 219 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 PLAC1Q9HBJ0 212 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 ARNT2Q9HBZ2 717 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 PNRC2Q9NPJ4 139 aaKnown RBP5.55□□□□□ -1.52
PRPF39-209ENST00000556353 NCKIPSDQ9NZQ3 722 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 WNT16Q9UBV4 365 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 DTX4Q9Y2E6 619 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 PLEKHH2Q8IVE3 1493 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 XIRP1Q702N8 1843 aaKnown RBP5.55□□□□□ -1.52
PRPF39-209ENST00000556353 MAST1Q9Y2H9 1570 aa5.55□□□□□ -1.52
PRPF39-209ENST00000556353 ZC3H13Q5T200 1668 aaKnown RBP5.54□□□□□ -1.52
PRPF39-209ENST00000556353 TCOF1Q13428 1488 aaKnown RBP5.54□□□□□ -1.52
PRPF39-209ENST00000556353 MBD3L5A6NJ08 208 aaPredicted RBP5.54□□□□□ -1.52
PRPF39-209ENST00000556353 AQP12BA6NM10 295 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 SLC38A8A6NNN8 435 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 HOXC6P09630 235 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 SLC16A2P36021 539 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 TECP42680 631 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 SLC4A8Q2Y0W8 1093 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 ZNF324BQ6AW86 544 aaPredicted RBP5.54□□□□□ -1.52
PRPF39-209ENST00000556353 TRILQ7L0X0 811 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 FAM185AQ8N0U4 392 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 GABPB2Q8TAK5 448 aaPredicted RBP5.54□□□□□ -1.52
PRPF39-209ENST00000556353 ELP5Q8TE02 316 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 RSC1A1Q92681 617 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 TMEM41AQ96HV5 264 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 URB1-AS1Q96HZ7 61 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 ZNF304Q9HCX3 659 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 ARFGAP3Q9NP61 516 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 LIN7CQ9NUP9 197 aaKnown RBP5.54□□□□□ -1.52
PRPF39-209ENST00000556353 ZNF112Q9UJU3 913 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 CNTN6Q9UQ52 1028 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 ALKQ9UM73 1620 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 NPATQ14207 1427 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 CNTLNQ9NXG0 1405 aa5.54□□□□□ -1.52
PRPF39-209ENST00000556353 KDM5DQ9BY66 1539 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 CCDC141Q6ZP82 1450 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 DEPDC5O75140 1603 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 EIF2AK4Q9P2K8 1649 aaKnown RBP5.53□□□□□ -1.52
PRPF39-209ENST00000556353 OR6C75A6NL08 312 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 PRC1O43663 620 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 GPR18Q14330 331 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms