RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 IDUAP35475 653 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 MAPK9P45984 424 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 RBM5P52756 815 aaKnown RBP eCLIP3.74□□□□□ -1.81
SRP54-209ENST00000555746 HMGA2P52926 109 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 SLC37A1P57057 533 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 TLE2Q04725 743 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 PDCLQ13371 301 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 TAF12Q16514 161 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 PFKFB3Q16875 520 aaPredicted RBP3.74□□□□□ -1.81
SRP54-209ENST00000555746 CTXN3Q4LDR2 81 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 AWAT1Q58HT5 328 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 MAP3K21Q5TCX8 1036 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 TFAP2DQ7Z6R9 452 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 ADGRG3Q86Y34 549 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 CPOQ8IVL8 374 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 ADGRF3Q8IZF5 1079 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 ENDOVQ8N8Q3 282 aaKnown RBP3.74□□□□□ -1.81
SRP54-209ENST00000555746 FSIP1Q8NA03 581 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 PNLDC1Q8NA58 520 aaKnown RBP3.74□□□□□ -1.81
SRP54-209ENST00000555746 C8orf58Q8NAV2 365 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 IL17REQ8NFR9 667 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.74□□□□□ -1.81
SRP54-209ENST00000555746 CLEC4CQ8WTT0 213 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 CELF1Q92879 486 aaKnown RBP3.74□□□□□ -1.81
SRP54-209ENST00000555746 ARRDC3Q96B67 414 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 FAM122AQ96E09 287 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 GPR78Q96P69 363 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 ARHGAP39Q9C0H5 1083 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 PLEKHA2Q9HB19 425 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 ERVK-5Q9HDB9 667 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 RIC8AQ9NPQ8 531 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 HEMK1Q9Y5R4 338 aaPredicted RBP3.74□□□□□ -1.81
SRP54-209ENST00000555746 CNTNAP1P78357 1384 aa3.74□□□□□ -1.81
SRP54-209ENST00000555746 CLIP1P30622 1438 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 GRM8O00222 908 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 RRHO14718 337 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 CNTN5O94779 1100 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 PRKCGP05129 697 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 PEPDP12955 493 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 RXRAP19793 462 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 TGM2P21980 687 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 PNPLA4P41247 253 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 SOX2P48431 317 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 VPS41P49754 854 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 MAP2K1Q02750 393 aaPredicted RBP3.73□□□□□ -1.81
SRP54-209ENST00000555746 SLC10A2Q12908 348 aaPredicted RBP3.73□□□□□ -1.81
SRP54-209ENST00000555746 IDI1Q13907 227 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 KPNB1Q14974 876 aaKnown RBP3.73□□□□□ -1.81
SRP54-209ENST00000555746 ANKRD1Q15327 319 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 SEC23BQ15437 767 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 ALFQ53S48 1182 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 ZNF484Q5JVG2 852 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 LVRNQ6Q4G3 990 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 ZNF474Q6S9Z5 364 aaPredicted RBP3.73□□□□□ -1.81
SRP54-209ENST00000555746 KIAA1324Q6UXG2 1013 aaKnown RBP3.73□□□□□ -1.81
SRP54-209ENST00000555746 RD3Q7Z3Z2 195 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 CEP70Q8NHQ1 597 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 ATP2A3Q93084 1043 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 EVI5LQ96CN4 794 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 ZNF764Q96H86 408 aaPredicted RBP3.73□□□□□ -1.81
SRP54-209ENST00000555746 COG8Q96MW5 612 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 TRIM2Q9C040 744 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 MTMR4Q9NYA4 1195 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 C9orf78Q9NZ63 289 aaPredicted RBP3.73□□□□□ -1.81
SRP54-209ENST00000555746 DNAJC16Q9Y2G8 782 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 TNRC6CQ9HCJ0 1690 aaKnown RBP3.73□□□□□ -1.81
SRP54-209ENST00000555746 QSER1Q2KHR3 1735 aa3.73□□□□□ -1.81
SRP54-209ENST00000555746 EMSYQ7Z589 1322 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 ARHGAP31Q2M1Z3 1444 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 ADAMTS13Q76LX8 1427 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 A0A1B0GVC2 190 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 STX16-NPEPL1H3BU86 382 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 STX16O14662 325 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 CSF1P09603 554 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 ACP5P13686 325 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 TACR3P29371 465 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 CCR5P51681 352 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 ADPRHP54922 357 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 INHBEP58166 350 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 VAMP2P63027 116 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 SHC2P98077 582 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 UBE3AQ05086 875 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 POU5F1BQ06416 359 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 CHRNDQ07001 517 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 CDK18Q07002 472 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 FOXF2Q12947 444 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 THOC5Q13769 683 aaKnown RBP3.72□□□□□ -1.81
SRP54-209ENST00000555746 CC2D1BQ5T0F9 858 aaKnown RBP3.72□□□□□ -1.81
SRP54-209ENST00000555746 ZNF782Q6ZMW2 699 aaPredicted RBP3.72□□□□□ -1.81
SRP54-209ENST00000555746 RBM44Q6ZP01 1051 aaKnown RBP3.72□□□□□ -1.81
SRP54-209ENST00000555746 PAQR4Q8N4S7 273 aaPredicted RBP3.72□□□□□ -1.81
SRP54-209ENST00000555746 OR52N4Q8NGI2 321 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 BCAS4Q8TDM0 211 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 ZFPM2Q8WW38 1151 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 FCRL5Q96RD9 977 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 REEP2Q9BRK0 252 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 EFHD1Q9BUP0 239 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 HERC2P3Q9BVR0 1158 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 SEMA4CQ9C0C4 833 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 TXNRD2Q9NNW7 524 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms