RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 KIF19Q2TAC6 998 aa25.07■■□□□ 1.6
PRKCH-216ENST00000555542 POM121L1PQ3SYA9 428 aa25.07■■□□□ 1.6
PRKCH-216ENST00000555542 DCAF4L2Q8NA75 395 aa25.07■■□□□ 1.6
PRKCH-216ENST00000555542 JOSD2Q8TAC2 188 aa25.07■■□□□ 1.6
PRKCH-216ENST00000555542 PCDHB18PQ96TA0 734 aa25.07■■□□□ 1.6
PRKCH-216ENST00000555542 VPS51Q9UID3 782 aa25.07■■□□□ 1.6
PRKCH-216ENST00000555542 FNDC3AQ9Y2H6 1198 aaKnown RBP25.07■■□□□ 1.6
PRKCH-216ENST00000555542 SNX11Q9Y5W9 270 aa25.07■■□□□ 1.6
PRKCH-216ENST00000555542 IGLV3-10A0A075B6K4 115 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 TBC1D3DA0A087WVF3 549 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 TBC1D3IA0A087WXS9 549 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 TBC1D3EA0A087X179 549 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 TBC1D3KA0A087X1G2 549 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 A0A1W2PPC4 97 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 TBC1D3FA6NER0 549 aaPredicted RBP25.06■■□□□ 1.6
PRKCH-216ENST00000555542 TBC1D3LB9A6J9 549 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 GJB6O95452 261 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 CALB1P05937 261 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 CCDC172P0C7W6 258 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 TBC1D3HP0C7X1 549 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 KRT3P12035 628 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 SRCP12931 536 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 SPINK2P20155 84 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 CCDC14Q49A88 953 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 TBC1D3GQ6DHY5 549 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 TBC1D3CQ6IPX1 549 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 CAVIN1Q6NZI2 390 aaKnown RBP25.06■■□□□ 1.6
PRKCH-216ENST00000555542 BNIPLQ7Z465 357 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 TBC1D3Q8IZP1 549 aaPredicted RBP25.06■■□□□ 1.6
PRKCH-216ENST00000555542 SKA1Q96BD8 255 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 PSMB7Q99436 277 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 SPON2Q9BUD6 331 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 ACE2Q9BYF1 805 aaPredicted RBP25.06■■□□□ 1.6
PRKCH-216ENST00000555542 HSD3B7Q9H2F3 369 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 AASDHPPTQ9NRN7 309 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 HS3ST2Q9Y278 367 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 PLXNA2O75051 1894 aa25.06■■□□□ 1.6
PRKCH-216ENST00000555542 A0A0D9SEW6 157 aa25.05■■□□□ 1.6
PRKCH-216ENST00000555542 SMTNL1A8MU46 457 aa25.05■■□□□ 1.6
PRKCH-216ENST00000555542 PLK4O00444 970 aa25.05■■□□□ 1.6
PRKCH-216ENST00000555542 ALOX15BO15296 676 aa25.05■■□□□ 1.6
PRKCH-216ENST00000555542 ZNF883P0CG24 379 aa25.05■■□□□ 1.6
PRKCH-216ENST00000555542 RACK1P63244 317 aaKnown RBP25.05■■□□□ 1.6
PRKCH-216ENST00000555542 TRIP6Q15654 476 aaKnown RBP25.05■■□□□ 1.6
PRKCH-216ENST00000555542 LINGO4Q6UY18 593 aa25.05■■□□□ 1.6
PRKCH-216ENST00000555542 APTXQ7Z2E3 356 aaKnown RBP25.05■■□□□ 1.6
PRKCH-216ENST00000555542 PIP4K2CQ8TBX8 421 aa25.05■■□□□ 1.6
PRKCH-216ENST00000555542 SLC6A18Q96N87 628 aa25.05■■□□□ 1.6
PRKCH-216ENST00000555542 AGPAT1Q99943 283 aa25.05■■□□□ 1.6
PRKCH-216ENST00000555542 TMEM131Q92545 1883 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 DOCK4Q8N1I0 1966 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 ANKRD62A6NC57 917 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 C2CD4BA6NLJ0 364 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 CBX4O00257 560 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 MCF2LO15068 1137 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 ENDOD1O94919 500 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 MT-CO1P00395 513 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 FERP16591 822 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 RRM1P23921 792 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 DRD3P35462 400 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 PTPN9P43378 593 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 METAP1P53582 386 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 FAM193AP78312 1265 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 FILIP1LQ4L180 1135 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 RAB6CQ53S08 254 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 RWDD4Q6NW29 188 aaKnown RBP25.04■■□□□ 1.6
PRKCH-216ENST00000555542 STRADAQ7RTN6 431 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 PHF13Q86YI8 300 aaPredicted RBP25.04■■□□□ 1.6
PRKCH-216ENST00000555542 DRC7Q8IY82 874 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 OR7D4Q8NG98 312 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 FAM172AQ8WUF8 416 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 RAB6CQ9H0N0 254 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 ATP13A1Q9HD20 1204 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 OR12D3Q9UGF7 316 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 SARDHQ9UL12 918 aa25.04■■□□□ 1.6
PRKCH-216ENST00000555542 PCNX2A6NKB5 2137 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 ILVBLA1L0T0 632 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 K7ERQ8 282 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 SLC7A4O43246 635 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 RTN2O75298 545 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 TOP3BO95985 862 aaKnown RBP25.03■■□□□ 1.6
PRKCH-216ENST00000555542 GPD1P21695 349 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 ADRA1BP35368 520 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 RECQLP46063 649 aaPredicted RBP25.03■■□□□ 1.6
PRKCH-216ENST00000555542 CCR5P51681 352 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 PTP4A2Q12974 167 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 SUZ12Q15022 739 aaKnown RBP25.03■■□□□ 1.6
PRKCH-216ENST00000555542 ST3GAL2Q16842 350 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 RETSATQ6NUM9 610 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 DNAJC24Q6P3W2 148 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 ZNF783Q6ZMS7 281 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 C3orf20Q8ND61 904 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 BPIFA3Q9BQP9 254 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 ORAI3Q9BRQ5 295 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 SCNM1Q9BWG6 230 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 PPARGC1AQ9UBK2 798 aaKnown RBP25.03■■□□□ 1.6
PRKCH-216ENST00000555542 PPM1HQ9ULR3 514 aa25.03■■□□□ 1.6
PRKCH-216ENST00000555542 TPX2Q9ULW0 747 aaKnown RBP25.03■■□□□ 1.6
PRKCH-216ENST00000555542 KCNK3O14649 394 aa25.02■■□□□ 1.6
PRKCH-216ENST00000555542 HYAL3O43820 417 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms