RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SLC30A5Q8TAD4 765 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 GANCQ8TET4 914 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 RXFP2Q8WXD0 754 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 SKA1Q96BD8 255 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 PCDHB18PQ96TA0 734 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 PSMB7Q99436 277 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 AGPAT1Q99943 283 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 C11orf70Q9BRQ4 267 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 ORAI3Q9BRQ5 295 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 NEUROG2Q9H2A3 272 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 TM9SF3Q9HD45 589 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 PPM1HQ9ULR3 514 aa12.14□□□□□ -0.47
VRK1-204ENST00000555351 CNOT1A5YKK6 2376 aaKnown RBP12.14□□□□□ -0.47
VRK1-204ENST00000555351 A0A1W2PP55 124 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 TCRBV5S1A1TA0A578 114 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 ANKRD62A6NC57 917 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 C1QTNF3-AMACRE9PGA6 284 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 GIPC1O14908 333 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 LATO43561 262 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 FSBPO95073 299 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 SRCP12931 536 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 PTMSP20962 102 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 GGCXP38435 758 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 PSMD8P48556 350 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 MAPKAPK2P49137 400 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 ZNF165P49910 485 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 ATP11AP98196 1134 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 SCAPQ12770 1279 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 KLHL40Q2TBA0 621 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 ACCSLQ4AC99 568 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 MANEALQ5VSG8 457 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 RETSATQ6NUM9 610 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 NCEH1Q6PIU2 408 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 IRF2BP2Q7Z5L9 587 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 GLRX5Q86SX6 157 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 PLPP6Q8IY26 295 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 EMC1Q8N766 993 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 TMIEQ8NEW7 156 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 SYT11Q9BT88 431 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 SELENOOQ9BVL4 669 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 CEP44Q9C0F1 390 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 FSCN3Q9NQT6 498 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 OR12D3Q9UGF7 316 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 SERGEFQ9UGK8 458 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 VPS51Q9UID3 782 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 WASF3Q9UPY6 502 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 GON4LQ3T8J9 2241 aa12.13□□□□□ -0.47
VRK1-204ENST00000555351 ASCC3Q8N3C0 2202 aaKnown RBP12.13□□□□□ -0.47
VRK1-204ENST00000555351 A0A1B0GTH6 734 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 VILLO15195 856 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 SRGAP2O75044 1071 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 RHOQP17081 205 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 DESP17661 470 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 GPD1P21695 349 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 RFC1P35251 1148 aaPredicted RBP12.12□□□□□ -0.47
VRK1-204ENST00000555351 DRD3P35462 400 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 ZNF143P52747 638 aaPredicted RBP12.12□□□□□ -0.47
VRK1-204ENST00000555351 ADPRHP54922 357 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 HDAC4P56524 1084 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 GEMIN4P57678 1058 aaKnown RBP12.12□□□□□ -0.47
VRK1-204ENST00000555351 BNC1Q01954 994 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 SUZ12Q15022 739 aaKnown RBP12.12□□□□□ -0.47
VRK1-204ENST00000555351 ZNF423Q2M1K9 1284 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 HLA-BQ31612 363 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 FIGNQ5HY92 759 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 PPP1R15BQ5SWA1 713 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 ACAD10Q6JQN1 1059 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 CAVIN1Q6NZI2 390 aaKnown RBP12.12□□□□□ -0.47
VRK1-204ENST00000555351 NEK5Q6P3R8 708 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 WDR59Q6PJI9 974 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 NAXDQ8IW45 347 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 ATP11CQ8NB49 1132 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 JOSD2Q8TAC2 188 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 FAM172AQ8WUF8 416 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 SNX19Q92543 992 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 BAP1Q92560 729 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 ISG20Q96AZ6 181 aaKnown RBP12.12□□□□□ -0.47
VRK1-204ENST00000555351 CNPY3Q9BT09 278 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 FUCA2Q9BTY2 467 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 ACE2Q9BYF1 805 aaPredicted RBP12.12□□□□□ -0.47
VRK1-204ENST00000555351 GAREM1Q9H706 876 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 PREBQ9HCU5 417 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 TMEM248Q9NWD8 314 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 AIPL1Q9NZN9 384 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 MPP6Q9NZW5 540 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 DMTF1Q9Y222 760 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 ANKRD6Q9Y2G4 727 aa12.12□□□□□ -0.47
VRK1-204ENST00000555351 SPTBN2O15020 2390 aa12.11□□□□□ -0.47
VRK1-204ENST00000555351 A0A0D9SEW6 157 aa12.11□□□□□ -0.47
VRK1-204ENST00000555351 A0A1B0GVT2 93 aa12.11□□□□□ -0.47
VRK1-204ENST00000555351 EIF3CLB5ME19 914 aaKnown RBP12.11□□□□□ -0.47
VRK1-204ENST00000555351 FLRT2O43155 660 aa12.11□□□□□ -0.47
VRK1-204ENST00000555351 TEX33O43247 280 aa12.11□□□□□ -0.47
VRK1-204ENST00000555351 PLRG1O43660 514 aaKnown RBP12.11□□□□□ -0.47
VRK1-204ENST00000555351 PCDHGA12O60330 932 aa12.11□□□□□ -0.47
VRK1-204ENST00000555351 ZMPSTE24O75844 475 aa12.11□□□□□ -0.47
VRK1-204ENST00000555351 PRNPP04156 253 aa12.11□□□□□ -0.47
VRK1-204ENST00000555351 GZMAP12544 262 aa12.11□□□□□ -0.47
VRK1-204ENST00000555351 VAV1P15498 845 aa12.11□□□□□ -0.47
VRK1-204ENST00000555351 L1CAMP32004 1257 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms