RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 WFDC5Q8TCV5 224 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 P2RY11Q96G91 374 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 ZNF670Q9BS34 389 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 HEMGNQ9BXL5 484 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 CALN1Q9BXU9 219 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 OSBPL8Q9BZF1 889 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 C11orf16Q9NQ32 467 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 SPATA6Q9NWH7 488 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-218ENST00000555213 ELOVL2Q9NXB9 296 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 PLA2G4CQ9UP65 541 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 NEU3Q9UQ49 428 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 R3HDM2Q9Y2K5 976 aaKnown RBP11.18□□□□□ -0.62
SHMT2-218ENST00000555213 STARD13Q9Y3M8 1113 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 HCN4Q9Y3Q4 1203 aa11.18□□□□□ -0.62
SHMT2-218ENST00000555213 hCG_1818297A0A087WSY0 165 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 LRRD1A4D1F6 860 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 CHURC1-FNTBB4DL54 471 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 PRRT4C9JH25 899 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 K7EQS6 105 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 KRIT1O00522 736 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 KLF8O95600 359 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-218ENST00000555213 DLDP09622 509 aaKnown RBP11.17□□□□□ -0.62
SHMT2-218ENST00000555213 GOT1P17174 413 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 SERPINB6P35237 376 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 TIE1P35590 1138 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 NNMTP40261 264 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 PTGIRP43119 386 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 CCR3P51677 355 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 NUBP1P53384 320 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 GNA12Q03113 381 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 MESP2Q0VG99 397 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 MMRN1Q13201 1228 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 KCTD19Q17RG1 926 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-218ENST00000555213 PARP15Q460N3 678 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 FNDC3BQ53EP0 1204 aaKnown RBP11.17□□□□□ -0.62
SHMT2-218ENST00000555213 FSCBQ5H9T9 825 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 EOGTQ5NDL2 527 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 CCDC181Q5TID7 509 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 TTC27Q6P3X3 843 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 TMCO3Q6UWJ1 677 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 Q6ZS52 159 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 ADIPOR2Q86V24 386 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 NLRP14Q86W24 1093 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 ZNF354CQ86Y25 554 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 TMEM105Q8N8V8 129 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 DCAF4L2Q8NA75 395 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-218ENST00000555213 USP33Q8TEY7 942 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 CSPG4P5Q96PW8 444 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 PCDH18Q9HCL0 1135 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 ATP13A1Q9HD20 1204 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 DMGDHQ9UI17 866 aaKnown RBP11.17□□□□□ -0.62
SHMT2-218ENST00000555213 SLC25A13Q9UJS0 675 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 HPCAL4Q9UM19 191 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 SLC8A2Q9UPR5 921 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 EFR3BQ9Y2G0 817 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 ZDBF2Q9HCK1 2354 aa11.17□□□□□ -0.62
SHMT2-218ENST00000555213 WASH4PA8MWX3 477 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 ZBTB24O43167 697 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-218ENST00000555213 LAMTOR5O43504 91 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 PI15O43692 258 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 HNRNPLP14866 589 aaKnown RBP eCLIP11.16□□□□□ -0.62
SHMT2-218ENST00000555213 AVPR2P30518 371 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 KIR2DL1P43626 348 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-218ENST00000555213 PLK1P53350 603 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 GEMIN4P57678 1058 aaKnown RBP11.16□□□□□ -0.62
SHMT2-218ENST00000555213 YBEYP58557 167 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-218ENST00000555213 TUBB4BP68371 445 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 MTAPQ13126 283 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 DPYSQ14117 519 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 DPYSL3Q14195 570 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 STARD3Q14849 445 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 POLD3Q15054 466 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-218ENST00000555213 ELF2Q15723 593 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 PPP2R5EQ16537 467 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 TEX35Q5T0J7 233 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 EGFLAMQ63HQ2 1017 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 IL31Q6EBC2 164 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 RETSATQ6NUM9 610 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 SERPINA13PQ6UXR4 307 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 KIAA0907Q7Z7F0 614 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-218ENST00000555213 VSIG1Q86XK7 387 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 SFTPA1Q8IWL2 248 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 LZTR1Q8N653 840 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 ALLCQ8N6M5 410 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 PQLC3Q8N755 202 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 C12orf50Q8NA57 414 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-218ENST00000555213 DTWD2Q8NBA8 298 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 UBXN4Q92575 508 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 EZH1Q92800 747 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-218ENST00000555213 TTC17Q96AE7 1141 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 FAF2Q96CS3 445 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 RBM41Q96IZ5 413 aaKnown RBP11.16□□□□□ -0.62
SHMT2-218ENST00000555213 LMLNQ96KR4 655 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 KRT12Q99456 494 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 HINFPQ9BQA5 517 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 FEM1AQ9BSK4 669 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 SPON2Q9BUD6 331 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 PARD6BQ9BYG5 372 aa11.16□□□□□ -0.62
SHMT2-218ENST00000555213 DDX47Q9H0S4 455 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms