RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 KDELC1Q6UW63 502 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 MARK2Q7KZI7 788 aaKnown RBP9.09□□□□□ -0.95
TDP1-210ENST00000554976 TMEM135Q86UB9 458 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 PALM2Q8IXS6 379 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 BANPQ8N9N5 519 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 HMCESQ96FZ2 354 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 CYTH2Q99418 400 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 UGT1A7Q9HAW7 530 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 UGT1A10Q9HAW8 530 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 UGT1A8Q9HAW9 530 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 SEPT10Q9P0V9 454 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 STK39Q9UEW8 545 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 DNMT3LQ9UJW3 386 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 ZCWPW2A0A1B0GU75 182 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 F5H423 210 aaPredicted RBP9.09□□□□□ -0.95
TDP1-210ENST00000554976 POC1B-GALNT4F8VUJ3 575 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 C2CD2LO14523 706 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 STC2O76061 302 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 FGF18O76093 207 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 ASMTLO95671 621 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 RAG1P15918 1043 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 PPP3CCP48454 512 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 MAPKAPK2P49137 400 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 SGSHP51688 502 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 NEK3P51956 506 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 WDR4P57081 412 aaKnown RBP9.09□□□□□ -0.95
TDP1-210ENST00000554976 SPARCL1Q14515 664 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 QPCTQ16769 361 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 RAP1GAP2Q684P5 730 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 Q6ZNB5 142 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 OTOP3Q7RTS5 596 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 PID1Q7Z2X4 250 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 PGBD5Q8N414 524 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 ATPAF2Q8N5M1 289 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 SERAC1Q96JX3 654 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 MKS1Q9NXB0 559 aa9.09□□□□□ -0.95
TDP1-210ENST00000554976 CXXC1Q9P0U4 656 aaPredicted RBP9.09□□□□□ -0.95
TDP1-210ENST00000554976 KLHL8Q9P2G9 620 aaPredicted RBP9.09□□□□□ -0.95
TDP1-210ENST00000554976 C2orf78A6NCI8 922 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 SDR42E2A6NKP2 422 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 DFFAO00273 331 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 ACSL4O60488 711 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 FAM107AO95990 144 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 PPM1AP35813 382 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 ATP5C1P36542 298 aaKnown RBP9.08□□□□□ -0.96
TDP1-210ENST00000554976 CRYMQ14894 314 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 ITPRIPL1Q6GPH6 555 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 TIGD7Q6NT04 549 aaPredicted RBP9.08□□□□□ -0.96
TDP1-210ENST00000554976 MIB1Q86YT6 1006 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 UNC5BQ8IZJ1 945 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 OR52K1Q8NGK4 314 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 CKAP2Q8WWK9 683 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 HERVK_113Q902F9 699 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 TTC17Q96AE7 1141 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 STAMBPL1Q96FJ0 436 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 CFAP36Q96G28 342 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 TMEM169Q96HH4 297 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 GLOD4Q9HC38 313 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 SENP1Q9P0U3 644 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 IRAK3Q9Y616 596 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 ARHGAP42A6NI28 874 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 RASA4BC9J798 803 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 J3KR12 359 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 RASA4O43374 803 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 CPP00450 1065 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 DHRS4L1P0CG22 281 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 BRAFP15056 766 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 DNAJB1P25685 340 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 TWF1Q12792 350 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 SERINC3Q13530 473 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 C11orf91Q3C1V1 193 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 FAM117BQ6P1L5 589 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 RGS9BPQ6ZS82 235 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 OTOP2Q7RTS6 562 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 CIR1Q86X95 450 aaPredicted RBP9.08□□□□□ -0.96
TDP1-210ENST00000554976 CCNJLQ8IV13 435 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 SRRM1Q8IYB3 904 aaKnown RBP9.08□□□□□ -0.96
TDP1-210ENST00000554976 ZNF473Q8WTR7 871 aaKnown RBP9.08□□□□□ -0.96
TDP1-210ENST00000554976 ISL2Q96A47 359 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 MRGPRX2Q96LB1 330 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 AGAP3Q96P47 875 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 TRABDQ9H4I3 376 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 LRRC40Q9H9A6 602 aa9.08□□□□□ -0.96
TDP1-210ENST00000554976 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.08□□□□□ -0.96
TDP1-210ENST00000554976 GMNCA6NCL1 334 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 TGM5O43548 720 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 RFPL1O75677 317 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 JCHAINP01591 159 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 URODP06132 367 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 CNPP09543 421 aaKnown RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 HOXD9P28356 352 aaPredicted RBP9.07□□□□□ -0.96
TDP1-210ENST00000554976 ETV4P43268 484 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 MAGEA12P43365 314 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 CRADDP78560 199 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 CREMQ03060 361 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 HECTD3Q5T447 861 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 CGB2Q6NT52 195 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 TIFABQ6ZNK6 161 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 SLC26A11Q86WA9 606 aa9.07□□□□□ -0.96
TDP1-210ENST00000554976 ARRDC2Q8TBH0 407 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms