RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	IL1R2	P27930	398 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	NTSR1	P30989	418 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	NEK3	P51956	506 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	AK2	P54819	239 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	SHH	Q15465	462 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	TRIM60	Q495X7	471 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	RRAGB	Q5VZM2	374 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	PLAG1	Q6DJT9	500 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	SUMO4	Q6EEV6	95 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	CTR9	Q6PD62	1173 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	SLC39A5	Q6ZMH5	540 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	TMEM179	Q6ZVK1	233 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	DPP9	Q86TI2	863 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	ERC1	Q8IUD2	1116 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	ABHD11	Q8NFV4	315 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	KIF1BP	Q96EK5	621 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	THAP7	Q9BT49	309 aa	Predicted RBP	5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	HOXC10	Q9NYD6	342 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	ZNF212	Q9UDV6	495 aa		5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	DDX60L	Q5H9U9	1706 aa	Known RBP	5.87	□□□□□ -1.47
PSMC6-208	ENST00000554956	MYO5A	Q9Y4I1	1855 aa	Known RBP	5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	ZBED9	Q6R2W3	1325 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	POM121B	A6NF01	834 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	FOXN3	O00409	490 aa	Predicted RBP	5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	SEPT4	O43236	478 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	STRN	O43815	780 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	CREB3	O43889	395 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	EXOC3	O60645	756 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	PGK1	P00558	417 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	PRKCB	P05771	671 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	EPHA3	P29320	983 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	PGD	P52209	483 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	TIAL1	Q01085	375 aa	Known RBP eCLIP	5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	ICA1	Q05084	483 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	ZNF543	Q08ER8	600 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	DAG1	Q14118	895 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	KRT72	Q14CN4	511 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	RNASE12	Q5GAN4	147 aa	Known RBP	5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	KIRREL2	Q6UWL6	708 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	CLASRP	Q8N2M8	674 aa	Known RBP	5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	BAD	Q92934	168 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	VOPP1	Q96AW1	172 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	VN1R3	Q9BXE9	311 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	UNK	Q9C0B0	810 aa	Known RBP	5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	TTYH1	Q9H313	450 aa	Predicted RBP	5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	PNPLA8	Q9NP80	782 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	PAG1	Q9NWQ8	432 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	DKK4	Q9UBT3	224 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	USP22	Q9UPT9	525 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956	RIPK3	Q9Y572	518 aa		5.86	□□□□□ -1.47
PSMC6-208	ENST00000554956		A0A0C4DFX4	3053 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	ATAD5	Q96QE3	1844 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	MAST2	Q6P0Q8	1798 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	CGB1	A6NKQ9	187 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	LINC01548	A6NM66	108 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	VWA5A	O00534	786 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	CES2	O00748	559 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	PMPCB	O75439	489 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	IL18RAP	O95256	599 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	SNAI1	O95863	264 aa	Predicted RBP	5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	ANXA2	P07355	339 aa	Known RBP	5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	MYL3	P08590	195 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	DLD	P09622	509 aa	Known RBP	5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	PARP1	P09874	1014 aa	Known RBP	5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	GK	P32189	559 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	PRIM2	P49643	509 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	TIRAP	P58753	221 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	TLE2	Q04725	743 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	HSP90AB4P	Q58FF6	505 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	FAM83B	Q5T0W9	1011 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	FAM109B	Q6ICB4	259 aa	Predicted RBP	5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	TMED8	Q6PL24	325 aa	Predicted RBP	5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	TRIM72	Q6ZMU5	477 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	METTL25	Q8N6Q8	603 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	C11orf44	Q8N8P7	122 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	WDYHV1	Q96HA8	205 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	TNIP3	Q96KP6	325 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	TBCB	Q99426	244 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	NAA15	Q9BXJ9	866 aa	Known RBP	5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	CIPC	Q9C0C6	399 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	MROH8	Q9H579	483 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	NLRC4	Q9NPP4	1024 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	ATP8A2	Q9NTI2	1148 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	GJB4	Q9NTQ9	266 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	SWAP70	Q9UH65	585 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	RIMKLB	Q9ULI2	386 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	SLC4A4	Q9Y6R1	1079 aa		5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	DDX49	Q9Y6V7	483 aa	Known RBP	5.85	□□□□□ -1.47
PSMC6-208	ENST00000554956	CDK5RAP2	Q96SN8	1893 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956		A0A087WZ62	844 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	IGKV6D-41	A0A0C4DH26	115 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	TISP43	B9A030	160 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	PSMD9	O00233	223 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	WDR46	O15213	610 aa	Known RBP	5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	SPRY2	O43597	315 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	PRDM1	O75626	825 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	NDUFB10	O96000	172 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	PRKCG	P05129	697 aa		5.84	□□□□□ -1.47
PSMC6-208	ENST00000554956	TSHR	P16473	764 aa		5.84	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms