RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 SKA1Q96BD8 255 aa3.96□□□□□ -1.77
KTN1-217ENST00000554831 RCN3Q96D15 328 aa3.96□□□□□ -1.77
KTN1-217ENST00000554831 PHF21BQ96EK2 531 aa3.96□□□□□ -1.77
KTN1-217ENST00000554831 CNBD2Q96M20 576 aa3.96□□□□□ -1.77
KTN1-217ENST00000554831 RTKNQ9BST9 563 aa3.96□□□□□ -1.77
KTN1-217ENST00000554831 MKS1Q9NXB0 559 aa3.96□□□□□ -1.77
KTN1-217ENST00000554831 DDX43Q9NXZ2 648 aaKnown RBP3.96□□□□□ -1.77
KTN1-217ENST00000554831 EURLQ9NYK6 297 aa3.96□□□□□ -1.77
KTN1-217ENST00000554831 PACSIN3Q9UKS6 424 aa3.96□□□□□ -1.77
KTN1-217ENST00000554831 MYRFQ9Y2G1 1151 aa3.96□□□□□ -1.77
KTN1-217ENST00000554831 CICQ96RK0 1608 aaPredicted RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 MYO10Q9HD67 2058 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 GOLGA8TH3BQL2 631 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 CLOCKO15516 846 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 ZMPSTE24O75844 475 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 AP2A1O95782 977 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 NFKB1P19838 968 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 MAP4P27816 1152 aaKnown RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 PIK3R1P27986 724 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 GRIA4P48058 902 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 PLK1P53350 603 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 KCNK10P57789 538 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 ZNF280AP59817 542 aaPredicted RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 PSME3P61289 254 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 MRPS5P82675 430 aaKnown RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 FAM91A1Q658Y4 838 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 GRAMD4Q6IC98 578 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 B3GNT6Q6ZMB0 384 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 ZNF786Q8N393 782 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 CELF6Q96J87 481 aaKnown RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 QKIQ96PU8 341 aaKnown RBP eCLIP3.96□□□□□ -1.784e-9■■■■■ 35.7
KTN1-217ENST00000554831 MIPEPQ99797 713 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 COLEC11Q9BWP8 271 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 BCO2Q9BYV7 579 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 ZNF395Q9H8N7 513 aaPredicted RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 EIF2B3Q9NR50 452 aaKnown RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 VPS45Q9NRW7 570 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 CDH22Q9UJ99 828 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 TMCO1Q9UM00 188 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 AP4B1Q9Y6B7 739 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 TAF1P21675 1872 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 hCG_2014768A0A024R1R8 64 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 DYTNA2CJ06 578 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 CXorf49A8MYA2 514 aaPredicted RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 DPYSL4O14531 572 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 TNPO2O14787 897 aaKnown RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 GSTA4O15217 222 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 USP1O94782 785 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 NEK3P51956 506 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 SP2Q02086 613 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 PPIL2Q13356 520 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 VGLL4Q14135 290 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 GNASQ5JWF2 1037 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 PPP1R15BQ5SWA1 713 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 GJC2Q5T442 439 aaPredicted RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 IQSEC1Q6DN90 963 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 FSTL4Q6MZW2 842 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 GLB1LQ6UWU2 654 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 DEFB132Q7Z7B7 95 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 CAND1Q86VP6 1230 aaKnown RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 DHFR2Q86XF0 187 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 PGAM4Q8N0Y7 254 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 CLEC4FQ8N1N0 589 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 TMEM86AQ8N2M4 240 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 PCDH20Q8N6Y1 951 aaKnown RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 ADAM32Q8TC27 787 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 EDEM1Q92611 657 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 USP13Q92995 863 aaPredicted RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 MRPL57Q9BQC6 102 aaKnown RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 GPRC5DQ9NZD1 345 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 IGSF9Q9P2J2 1179 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 PAIP2BQ9ULR5 123 aaKnown RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 SLC30A1Q9Y6M5 507 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 LRP5O75197 1615 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 NRCAMQ92823 1304 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 FAM95CA0A1B0GW59 222 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 SOWAHBA6NEL2 793 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 A6NHS1 94 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 SYCE1LA8MT33 242 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 E5RI56 91 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 TRIM38O00635 465 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 SEC24DO94855 1032 aaPredicted RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 SNRPB2P08579 225 aaKnown RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 SERPINF2P08697 491 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 AKAP5P24588 427 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 PRDX6P30041 224 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 AKT1P31749 480 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 ASPAP45381 313 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 MAP3K7CLP57077 242 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 CHRNB3Q05901 458 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 CMPK2Q5EBM0 449 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 PPM1JQ5JR12 505 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 SH3PXD2AQ5TCZ1 1133 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 SLC9A4Q6AI14 798 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 TTC30AQ86WT1 665 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 SPATA2LQ8IUW3 424 aaPredicted RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 DHRSXQ8N5I4 330 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 UCMAQ8WVF2 138 aa3.96□□□□□ -1.78
KTN1-217ENST00000554831 PTCD3Q96EY7 689 aaKnown RBP3.96□□□□□ -1.78
KTN1-217ENST00000554831 TMEM79Q9BSE2 394 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms