RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CHORDC1Q9UHD1 332 aaPredicted RBP11.42□□□□□ -0.58
SRP54-205ENST00000554803 TBK1Q9UHD2 729 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 SIX4Q9UIU6 781 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 RABGEF1Q9UJ41 708 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 ZFP69BQ9UJL9 534 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 CHKBQ9Y259 395 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 NEUROG3Q9Y4Z2 214 aa11.42□□□□□ -0.58
SRP54-205ENST00000554803 SHROOM3Q8TF72 1996 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 SF3B1O75533 1304 aaKnown RBP eCLIP11.41□□□□□ -0.58
SRP54-205ENST00000554803 NUP210Q8TEM1 1887 aaPredicted RBP11.41□□□□□ -0.58
SRP54-205ENST00000554803 SMIM28A0A1B0GU29 152 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 LRRD1A4D1F6 860 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 RNF8O76064 485 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 TNNC2P02585 160 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 RHOP08100 348 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 DHRS4L1P0CG22 281 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 NEFHP12036 1026 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 CEACAM1P13688 526 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 CREB1P16220 341 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 CEBPBP17676 345 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 GNAZP19086 355 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 CNTFP26441 200 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 ATICP31939 592 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 VPS41P49754 854 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 MLLT6P55198 1093 aaPredicted RBP11.41□□□□□ -0.58
SRP54-205ENST00000554803 SLC18A2Q05940 514 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 SOX4Q06945 474 aaPredicted RBP11.41□□□□□ -0.58
SRP54-205ENST00000554803 MGAT5Q09328 741 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 GRIK3Q13003 919 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 DNAJC3Q13217 504 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 TRPC3Q13507 836 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 LBRQ14739 615 aaKnown RBP11.41□□□□□ -0.58
SRP54-205ENST00000554803 ZBTB6Q15916 424 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 PSMD5Q16401 504 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 XKR4Q5GH76 650 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 ZFYVE27Q5T4F4 411 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 DAB2IPQ5VWQ8 1189 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 SPOPLQ6IQ16 392 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 LVRNQ6Q4G3 990 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 RTL10Q7L3V2 364 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 NLRP9Q7RTR0 991 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 KBTBD6Q86V97 674 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 MAP7D3Q8IWC1 876 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 PALM2Q8IXS6 379 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 C1orf127Q8N9H9 656 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 BANPQ8N9N5 519 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 GSTCDQ8NEC7 633 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 CXorf38Q8TB03 319 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 HAUS1Q96CS2 278 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 NAF1Q96HR8 494 aaKnown RBP11.41□□□□□ -0.58
SRP54-205ENST00000554803 APOPT1Q96IL0 206 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 MCEEQ96PE7 176 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 PAFAH2Q99487 392 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 TTPALQ9BTX7 342 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 EDEM2Q9BV94 578 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 STN1Q9H668 368 aaKnown RBP11.41□□□□□ -0.58
SRP54-205ENST00000554803 ASB7Q9H672 318 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 PLEKHA5Q9HAU0 1116 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 CYP3A43Q9HB55 503 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 GOLGA2P5Q9HBQ8 144 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 APOBEC3GQ9HC16 384 aaKnown RBP11.41□□□□□ -0.58
SRP54-205ENST00000554803 ZFP14Q9HCL3 533 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 ASNSD1Q9NWL6 643 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 C2orf42Q9NWW7 574 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 CACNG4Q9UBN1 327 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 NUB1Q9Y5A7 615 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 CELSR3Q9NYQ7 3312 aa11.41□□□□□ -0.58
SRP54-205ENST00000554803 KALRNO60229 2985 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 CCDC163A0A0D9SF12 145 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 C4orf47A7E2U8 309 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 POC1B-GALNT4F8VUJ3 575 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 PPEF2O14830 753 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 ADAM12O43184 909 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 DIAPH2O60879 1101 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 TADA2AO75478 443 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 RPP40O75818 363 aaKnown RBP11.4□□□□□ -0.58
SRP54-205ENST00000554803 HAUS5O94927 633 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 CST3P01034 146 aaPredicted RBP11.4□□□□□ -0.58
SRP54-205ENST00000554803 MT-ND3P03897 115 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 ITGB3P05106 788 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 KCNE1P15382 129 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 KRT4P19013 534 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 ATP6V1C1P21283 382 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 CSRP1P21291 193 aaKnown RBP11.4□□□□□ -0.58
SRP54-205ENST00000554803 GDI1P31150 447 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 HOXC13P31276 330 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 RPA3P35244 121 aaPredicted RBP11.4□□□□□ -0.58
SRP54-205ENST00000554803 MAGEA6P43360 314 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 GABRB2P47870 512 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 SERPINB9P50453 376 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 OCRLQ01968 901 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 SLC25A11Q02978 314 aaKnown RBP11.4□□□□□ -0.58
SRP54-205ENST00000554803 TAF11Q15544 211 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 STXBP5Q5T5C0 1151 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 UBAP2Q5T6F2 1119 aaKnown RBP11.4□□□□□ -0.58
SRP54-205ENST00000554803 ATG16L1Q676U5 607 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 TCEAL6Q6IPX3 200 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 C1orf228Q6PIY5 440 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 Q6ZS52 159 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 CYS1Q717R9 158 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms