RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 NOS2P35228 1153 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 OXCT1P55809 520 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 TAS2R38P59533 333 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 SLC6A3Q01959 620 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 CNTN1Q12860 1018 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 DNAJC3Q13217 504 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 NME3Q13232 169 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 CAMK4Q16566 473 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 SOWAHCQ53LP3 525 aaPredicted RBP12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 ALFQ53S48 1182 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 CCDC157Q569K6 752 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 AGBL4Q5VU57 503 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 SMYD5Q6GMV2 418 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 OR6B2Q6IFH4 312 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 SLC26A9Q7LBE3 791 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 PDZD3Q86UT5 571 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 SLC47A2Q86VL8 602 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 TMPRSS12Q86WS5 348 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 CREBRFQ8IUR6 639 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 SH2D3CQ8N5H7 860 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 EID2Q8N6I1 236 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 PDCD7Q8N8D1 485 aaKnown RBP12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 ZNF397Q8NF99 534 aaPredicted RBP12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 RNF34Q969K3 372 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 NT5C3BQ969T7 300 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 SKA1Q96BD8 255 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 CNDP2Q96KP4 475 aaKnown RBP12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 RPRD1AQ96P16 312 aaPredicted RBP12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 NPY6RQ99463 290 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 ERVMER34-1Q9H9K5 563 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 GDF3Q9NR23 364 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 PIGVQ9NUD9 493 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 TPX2Q9ULW0 747 aaKnown RBP12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 PCDHGA1Q9Y5H4 931 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 SNX10Q9Y5X0 201 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 RP1P56715 2156 aa12.56□□□□□ -0.4
MTHFD1-207ENST00000554677 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 M0QYT0 321 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 SLC7A4O43246 635 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 DAB1O75553 588 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 LDOC1O95751 146 aaPredicted RBP12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 ITGAVP06756 1048 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 CTSLP07711 333 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 EPHA8P29322 1005 aaPredicted RBP12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 MAT2AP31153 395 aaKnown RBP12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 CXCR3P49682 368 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 ACADVLP49748 655 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 PTK2Q05397 1052 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 ZNF177Q13360 481 aaPredicted RBP12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 POM121L1PQ3SYA9 428 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 ACCSLQ4AC99 568 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 SFMBT2Q5VUG0 894 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 NAPEPLDQ6IQ20 393 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 Q6ZVU0 165 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 PRPF39Q86UA1 669 aaKnown RBP12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 TRIM69Q86WT6 500 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 FAM71AQ8IYT1 594 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 PIP4K2CQ8TBX8 421 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 OR8D1Q8WZ84 308 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 SIK2Q9H0K1 926 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 SCUBE2Q9NQ36 999 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 PLCB1Q9NQ66 1216 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 ARHGEF38Q9NXL2 777 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 DNAJC12Q9UKB3 198 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 MGAQ8IWI9 3026 aa12.55□□□□□ -0.4
MTHFD1-207ENST00000554677 DRGXA6NNA5 263 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 K7ERQ8 282 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 ALOX15BO15296 676 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 YKT6O15498 198 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 SMAD6O43541 496 aaKnown RBP12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 SNAP91O60641 907 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 CLDN11O75508 207 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 C1SP09871 688 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 SRCP12931 536 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 CDH5P33151 784 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 GABRB2P47870 512 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 CDH4P55283 916 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 KCNMA1Q12791 1236 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 INAVAQ3KP66 663 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 PIP5KL1Q5T9C9 394 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 FAM46CQ5VWP2 391 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 TRNP1Q6NT89 227 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 IQCHQ86VS3 1027 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 PGAP3Q96FM1 320 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 BBC3Q96PG8 261 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 PPP1R9BQ96SB3 815 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 TKTL2Q9H0I9 626 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 CAAP1Q9H8G2 361 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 TMPRSS4Q9NRS4 437 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 ZNF212Q9UDV6 495 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 SLC25A13Q9UJS0 675 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 VPS28Q9UK41 221 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 HS3ST2Q9Y278 367 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 CA5BQ9Y2D0 317 aa12.54□□□□□ -0.4
MTHFD1-207ENST00000554677 KIF26BQ2KJY2 2108 aa12.53□□□□□ -0.4
MTHFD1-207ENST00000554677 A0A087WV48 116 aa12.53□□□□□ -0.4
MTHFD1-207ENST00000554677 A0A0D9SEW6 157 aa12.53□□□□□ -0.4
MTHFD1-207ENST00000554677 E9PAM4 449 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms