RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 BDNFP23560 247 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 HNF1BP35680 557 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 PRPHP41219 470 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 MAPKAPK2P49137 400 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 SLC12A3P55017 1021 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 NOP14P78316 857 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 RBP5P82980 135 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 GTF2BQ00403 316 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 GUCY1B3Q02153 619 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 RHDQ02161 417 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 SEMG2Q02383 582 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 TAF10Q12962 218 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 STARD3Q14849 445 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 RTP5Q14D33 572 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 POSTNQ15063 836 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 SF3A1Q15459 793 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 ZRSR1Q15695 479 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 IL17AQ16552 155 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 ME3Q16798 604 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 KIF19Q2TAC6 998 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 CCDC157Q569K6 752 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 HYIQ5T013 277 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 DCAF12L1Q5VU92 463 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 EGFLAMQ63HQ2 1017 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 SLC39A4Q6P5W5 647 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 KIAA1324Q6UXG2 1013 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 OSTM1Q86WC4 334 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 SKAP1Q86WV1 359 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 LSRQ86X29 649 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 TMEM25Q86YD3 366 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 CSGALNACT2Q8N6G5 542 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 LRRC52Q8N7C0 313 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 MYCBPAPQ8TBZ2 947 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 GCN1Q92616 2671 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 GTF3C6Q969F1 213 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 TMEM176AQ96HP8 235 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 C8orf48Q96LL4 319 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 PWWP2AQ96N64 755 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 SLITRK1Q96PX8 696 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 XPO6Q96QU8 1125 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 MCMBPQ9BTE3 642 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 MMTAG2Q9BU76 263 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 HELZ2Q9BYK8 2649 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 PCED1AQ9H1Q7 454 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 PARVGQ9HBI0 331 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 METTL5Q9NRN9 209 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 AGO2Q9UKV8 859 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 CDH9Q9ULB4 789 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 ODF2LQ9ULJ1 636 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 BTBD3Q9Y2F9 522 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 SH3BP1Q9Y3L3 701 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 R3HCC1Q9Y3T6 440 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 SNX9Q9Y5X1 595 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 RAD54BQ9Y620 910 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 STYXL1Q9Y6J8 313 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 WDFY3Q8IZQ1 3526 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 APC2O95996 2303 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 ACACAQ13085 2346 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 GON4LQ3T8J9 2241 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 FREM2Q5SZK8 3169 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 IGSF10Q6WRI0 2623 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 NPHP3-ACAD11A0A0J9YXS1 232 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 WASH3PC4AMC7 463 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 PRRT4C9JH25 899 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 ANKRD63C9JTQ0 380 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 K7ENM7 598 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 FFAR3O14843 346 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 NPC1O15118 1278 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 TRIM24O15164 1050 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 DFNA5O60443 496 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 JAK2O60674 1132 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 ATP2C2O75185 946 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 ITGB3P05106 788 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 DBHP09172 617 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 FAM163BP0C2L3 166 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 LMO2P25791 158 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 YWHAQP27348 245 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 ACTN2P35609 894 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 LIMS1P48059 325 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 CSNK1EP49674 416 aaKnown RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 TPMTP51580 245 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 ZNF131P52739 623 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 CXADRP78310 365 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 IRX6P78412 446 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 TFAMQ00059 246 aaKnown RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 MYO1EQ12965 1108 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 TARDBPQ13148 414 aaKnown RBP eCLIP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 GNL2Q13823 731 aaKnown RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 NR1I3Q14994 352 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 E2F5Q15329 346 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 SOWAHAQ2M3V2 549 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 INAVAQ3KP66 663 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 HECTD3Q5T447 861 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 SNX30Q5VWJ9 437 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 FBXW10Q5XX13 1052 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 PCSK4Q6UW60 755 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 CRELD2Q6UXH1 353 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 HTR3DQ70Z44 454 aa5.09□□□□□ -1.59
ATXN3-229ENST00000554672 CENPQQ7L2Z9 268 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-229ENST00000554672 LIMS2Q7Z4I7 341 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms