RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 RGL1Q9NZL6 768 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 VPS54Q9P1Q0 977 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 CEP72Q9P209 647 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 ANKFY1Q9P2R3 1169 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 AFF4Q9UHB7 1163 aaKnown RBP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 PRSS50Q9UI38 385 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 TPCN1Q9ULQ1 816 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 ANKRD6Q9Y2G4 727 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 INSL5Q9Y5Q6 135 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 FASNP49327 2511 aaKnown RBP5.28□□□□□ -1.56
ATXN3-228ENST00000554592 COL4A3Q01955 1670 aa5.28□□□□□ -1.56
ATXN3-228ENST00000554592 DOCK8Q8NF50 2099 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 A0A0A6YYJ9 748 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 H0Y626 953 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 I3L4J1 428 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 ACKR2O00590 384 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 TBX3O15119 743 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 OPHN1O60890 802 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 RECQL4O94761 1208 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 TRIM16O95361 564 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 LYPLA2O95372 231 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 BAG4O95429 457 aaKnown RBP5.27□□□□□ -1.57
ATXN3-228ENST00000554592 ZNF888P0CJ79 500 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-228ENST00000554592 PF4V1P10720 104 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 IFNAR1P17181 557 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 GJA1P17302 382 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 C5AR1P21730 350 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 BRCC3P46736 316 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 TWF1Q12792 350 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 PLD1Q13393 1074 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 PRPF4BQ13523 1007 aaKnown RBP5.27□□□□□ -1.57
ATXN3-228ENST00000554592 CTTNQ14247 550 aaKnown RBP5.27□□□□□ -1.57
ATXN3-228ENST00000554592 KARSQ15046 597 aaKnown RBP5.27□□□□□ -1.57
ATXN3-228ENST00000554592 MUM1Q2TAK8 710 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 ITPRIPL2Q3MIP1 535 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 CTXN3Q4LDR2 81 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 TMEM196Q5HYL7 178 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 NXNQ6DKJ4 435 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 ARHGEF18Q6ZSZ5 1173 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 CXXC5Q7LFL8 322 aaKnown RBP5.27□□□□□ -1.57
ATXN3-228ENST00000554592 GPR155Q7Z3F1 870 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 ARID3BQ8IVW6 561 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-228ENST00000554592 ZBTB8OSQ8IWT0 167 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 BLIDQ8IZY5 108 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 APPL2Q8NEU8 664 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 TTC8Q8TAM2 541 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 TSPEARQ8WU66 669 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 EVPLQ92817 2033 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 RSPRY1Q96DX4 576 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 HSPBAP1Q96EW2 488 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 DYDC2Q96IM9 177 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 LRRC3BQ96PB8 259 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 PPP1R10Q96QC0 940 aaKnown RBP5.27□□□□□ -1.57
ATXN3-228ENST00000554592 NAP1L4Q99733 375 aaKnown RBP5.27□□□□□ -1.57
ATXN3-228ENST00000554592 HSD17B14Q9BPX1 270 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 ADPGKQ9BRR6 497 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 C2orf40Q9H1Z8 148 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 CXCL16Q9H2A7 254 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 SMPD4Q9NXE4 827 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 GTSE1Q9NYZ3 720 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 KCMF1Q9P0J7 381 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 FBXL5Q9UKA1 691 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 CNOT1A5YKK6 2376 aaKnown RBP5.27□□□□□ -1.57
ATXN3-228ENST00000554592 F5P12259 2224 aa5.27□□□□□ -1.57
ATXN3-228ENST00000554592 C2orf16Q68DN1 1984 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 SMIM28A0A1B0GU29 152 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 LNP1A1A4G5 178 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 LRRIQ4A6NIV6 560 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 EIF4E1BA6NMX2 242 aaKnown RBP5.26□□□□□ -1.57
ATXN3-228ENST00000554592 CDX4O14627 284 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-228ENST00000554592 TRDMT1O14717 391 aaKnown RBP5.26□□□□□ -1.57
ATXN3-228ENST00000554592 DCLK1O15075 740 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 SLC37A4O43826 429 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 CUTAO60888 179 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 FGF19O95750 216 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 MTHFD2P13995 350 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 GCFC2P16383 781 aaKnown RBP5.26□□□□□ -1.57
ATXN3-228ENST00000554592 DRD1P21728 446 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 MARCKSP29966 332 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-228ENST00000554592 RPL9P32969 192 aaKnown RBP5.26□□□□□ -1.57
ATXN3-228ENST00000554592 ALDH1A3P47895 512 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 CDK17Q00537 523 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 CYP4A11Q02928 519 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 ICAM4Q14773 271 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 MAPK6Q16659 721 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 UAP1L1Q3KQV9 507 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 ADCK5Q3MIX3 580 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 DCAF4L1Q3SXM0 396 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 FBXO43Q4G163 708 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 USP39Q53GS9 565 aaKnown RBP5.26□□□□□ -1.57
ATXN3-228ENST00000554592 ARHGAP15Q53QZ3 475 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 XKR4Q5GH76 650 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 NCAPH2Q6IBW4 605 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 ZNF280DQ6N043 979 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 C19orf48Q6RUI8 117 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 APBB1IPQ7Z5R6 666 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-228ENST00000554592 FBXL16Q8N461 479 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 DEFB124Q8NES8 71 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 OR14C36Q8NHC7 312 aa5.26□□□□□ -1.57
ATXN3-228ENST00000554592 WDR48Q8TAF3 677 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms