RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 RASGEF1CQ8N431 466 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MCEEQ96PE7 176 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RNF112Q9ULX5 631 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PLAGL1Q9UM63 463 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 A2MP01023 1474 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 FAM155AB1AL88 458 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RAB27BO00194 218 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PRPF3O43395 683 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SSX5O60225 188 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SEMA3DO95025 777 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CD52P31358 61 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RAET1GQ6H3X3 334 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SLC30A6Q6NXT4 461 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SRLQ86TD4 932 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 HID1Q8IV36 788 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PEX5LQ8IYB4 626 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GAD1Q99259 594 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RWDD2AQ9UIY3 292 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GRXCR1A8MXD5 290 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ENPP3O14638 875 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CLASP2O75122 1294 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ARL4CP56559 192 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MYL6P60660 151 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 POLD3Q15054 466 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF792Q3KQV3 632 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D25Q3MII6 688 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 FBXL19Q6PCT2 694 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 COMTD1Q86VU5 262 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CXorf40AQ8TE69 158 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 LXNQ9BS40 222 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 BCAS3Q9H6U6 928 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GPATCH2Q9NW75 528 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 DDIT4Q9NX09 232 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 IMPAD1Q9NX62 359 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GPRC5DQ9NZD1 345 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TCP11X1B4DZS4 312 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 M0QYT0 321 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CHUKO15111 745 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 NDUFB10O96000 172 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF8P17098 575 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CMA1P23946 247 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RRM2P31350 389 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SARSP49591 514 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ARSEP51690 589 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CYP4F3Q08477 520 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 EXOC3L2Q2M3D2 409 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ATOH1Q92858 354 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TRIM43Q96BQ3 446 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 HERPUD2Q9BSE4 406 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 OGDHLQ9ULD0 1010 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RAPGEF6Q8TEU7 1601 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SMIM30A4D0T7 59 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PDGFRAP16234 1089 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TSHRP16473 764 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 HNRNPKP61978 463 aaKnown RBP eCLIP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PTPN12Q05209 780 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SNAPC2Q13487 334 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CHPFQ8IZ52 775 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TRIM36Q9NQ86 728 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 HEATR5BQ9P2D3 2071 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MAP2P11137 1827 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 KDM3AQ9Y4C1 1321 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 VWA5AO00534 786 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RGS20O76081 388 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 HOXC12P31275 282 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 S100A5P33763 92 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TCF7P36402 384 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SERPINB10P48595 397 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RAB4BP61018 213 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ADCY2Q08462 1091 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MROH9Q5TGP6 573 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TDRPQ86YL5 185 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CCDC54Q8NEL0 328 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 DTNBP1Q96EV8 351 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GLT1D1Q96MS3 346 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RBMX2Q9Y388 322 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 COL17A1Q9UMD9 1497 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MYOFQ9NZM1 2061 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MAGI1Q96QZ7 1491 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 F5H6K3 240 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SLC31A1O15431 190 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF432O94892 652 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 GCFC2P16383 781 aaKnown RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CES1P23141 567 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 KLRC3Q07444 240 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 DENND1CQ8IV53 801 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 SLC22A15Q8IZD6 547 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 TRPM4Q8TD43 1214 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 EME1Q96AY2 570 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ACP6Q9NPH0 428 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 ERVK-18Q9QC07 812 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 LNPEPQ9UIQ6 1025 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 RCOR1Q9UKL0 485 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 HFM1A2PYH4 1435 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 WNK1Q9H4A3 2382 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MLH3Q9UHC1 1453 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 FARP2O94887 1054 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-212ENST00000554584 MYL2P10916 166 aa3.35□□□□□ -1.87
SYNE2-212ENST00000554584 CYP3A5P20815 502 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms