RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 TK2O00142 265 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 LIN7AO14910 233 aaPredicted RBP16■□□□□ 0.15
ARHGEF40-203ENST00000554514 MAP3K13O43283 966 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 LRIG2O94898 1065 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 CHRNGP07510 517 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 CYP2B6P20813 491 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 NAB1Q13506 487 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 LIMS2Q7Z4I7 341 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 MAPK15Q8TD08 544 aa16■□□□□ 0.15
ARHGEF40-203ENST00000554514 SERPINB5P36952 375 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 CRYBB1P53674 252 aaPredicted RBP15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 PPIDQ08752 370 aaKnown RBP15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 ZNF460Q14592 562 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 EML3Q32P44 896 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 XKR4Q5GH76 650 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 FRMD7Q6ZUT3 714 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 MYLK4Q86YV6 388 aaPredicted RBP15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 FAM136AQ96C01 138 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 VPS39Q96JC1 886 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 PPP1R10Q96QC0 940 aaKnown RBP15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 GBA3Q9H227 469 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 WDR55Q9H6Y2 383 aaPredicted RBP15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 F8W8V4 182 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 MT-CYBP00156 380 aaPredicted RBP15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 MPSTP25325 297 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 SCNN1GP51170 649 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 CCNHP51946 323 aaPredicted RBP15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 CDK18Q07002 472 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 GRM3Q14832 879 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 POU6F1Q14863 301 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 CCDC153Q494R4 210 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 BNIPLQ7Z465 357 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 HPS6Q86YV9 775 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 TDRD5Q8NAT2 981 aaKnown RBP15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 NMRAL1Q9HBL8 299 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 CASS4Q9NQ75 786 aa15.99■□□□□ 0.15
ARHGEF40-203ENST00000554514 G3V2L1 256 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 GABRDO14764 452 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 ZBTB14O43829 449 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 BDNFP23560 247 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 INSCQ1MX18 579 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 TMEM135Q86UB9 458 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 IPMKQ8NFU5 416 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 OR52B2Q96RD2 323 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 EPAS1Q99814 870 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 DNAJC28Q9NX36 388 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 NUDT5Q9UKK9 219 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 BPTFQ12830 3046 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 SF3B1O75533 1304 aaKnown RBP eCLIP15.98■□□□□ 0.151e-12■■■■■ 240.6
ARHGEF40-203ENST00000554514 ZNF195O14628 629 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 ZCCHC18P0CG32 403 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 ITGA7Q13683 1181 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 TAC4Q86UU9 113 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 PARK7Q99497 189 aaKnown RBP15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 CDH19Q9H159 772 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 ATXN3LQ9H3M9 355 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 PDCD11Q14690 1871 aaKnown RBP15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 SERPINB6P35237 376 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 NUMBP49757 651 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 ADAM17P78536 824 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 SEMA3BQ13214 749 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 USP10Q14694 798 aaKnown RBP15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 PCBP1Q15365 356 aaKnown RBP eCLIP15.98■□□□□ 0.159e-8■■■■□ 20.8
ARHGEF40-203ENST00000554514 RNF220Q5VTB9 566 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 IRGCQ6NXR0 463 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 MARK4Q96L34 752 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 SIKE1Q9BRV8 207 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 GATA5Q9BWX5 397 aaPredicted RBP15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 AP5M1Q9H0R1 490 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 TLK1Q9UKI8 766 aa15.98■□□□□ 0.15
ARHGEF40-203ENST00000554514 FBXO21O94952 628 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 THP07101 528 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 SP100P23497 879 aaPredicted RBP15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 LRPAP1P30533 357 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 HARS2P49590 506 aaKnown RBP15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 CTBP1Q13363 440 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 ITPRIPL1Q6GPH6 555 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 SLC41A1Q8IVJ1 513 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 MYLPFQ96A32 169 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 C1orf21Q9H246 121 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 CNGB3Q9NQW8 809 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 SCOCQ9UIL1 159 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 PCDHB12Q9Y5F1 795 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 AIM2O14862 343 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 TRIM13O60858 407 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 EPHA3P29320 983 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 DBN1Q16643 649 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 FAM110CQ1W6H9 321 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 LPCAT4Q643R3 524 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 KCTD11Q693B1 232 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 NXNQ6DKJ4 435 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 ANKRD23Q86SG2 305 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 DENND6AQ8IWF6 608 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 KCTD4Q8WVF5 259 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 NTAN1Q96AB6 310 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 CMTM5Q96DZ9 223 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 SGF29Q96ES7 293 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 CDH22Q9UJ99 828 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 ST3GAL5Q9UNP4 418 aa15.97■□□□□ 0.15
ARHGEF40-203ENST00000554514 SORCS3Q9UPU3 1222 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms