RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 CNTN1Q12860 1018 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 PTPN13Q12923 2485 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 ILKQ13418 452 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 ELAVL3Q14576 367 aaKnown RBP11.9□□□□□ -0.5
TUBB3-204ENST00000554116 CDCP2Q5VXM1 449 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 DENND1BQ6P3S1 775 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 IQCHQ86VS3 1027 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 SPACA3Q8IXA5 215 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 CCAR2Q8N163 923 aaKnown RBP11.9□□□□□ -0.5
TUBB3-204ENST00000554116 TMEM145Q8NBT3 493 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 SERPINB11Q96P15 392 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 GBP4Q96PP9 640 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 ACP6Q9NPH0 428 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 PPM1HQ9ULR3 514 aa11.9□□□□□ -0.5
TUBB3-204ENST00000554116 TRPM6Q9BX84 2022 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 A0A1W2PNU3 283 aaPredicted RBP11.89□□□□□ -0.51
TUBB3-204ENST00000554116 I6L893 689 aaPredicted RBP11.89□□□□□ -0.51
TUBB3-204ENST00000554116 ERVH48-1M5A8F1 160 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 ATP9BO43861 1147 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 TRUB2O95900 331 aaKnown RBP11.89□□□□□ -0.51
TUBB3-204ENST00000554116 CTSLP07711 333 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 GLDCP23378 1020 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 DGKAP23743 735 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 GCNT1Q02742 428 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 CCDC173Q0VFZ6 552 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 TBC1D25Q3MII6 688 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 POM121L1PQ3SYA9 428 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 PIP5KL1Q5T9C9 394 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 TRIM69Q86WT6 500 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 SKA1Q96BD8 255 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 HIC2Q96JB3 615 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 NOX5Q96PH1 765 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 SPAG5Q96R06 1193 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 SEMA4CQ9C0C4 833 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 INTS2Q9H0H0 1204 aaKnown RBP11.89□□□□□ -0.51
TUBB3-204ENST00000554116 KDM4CQ9H3R0 1056 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 DACH1Q9UI36 760 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 CLCA2Q9UQC9 943 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 RELNP78509 3460 aa11.89□□□□□ -0.51
TUBB3-204ENST00000554116 E5RJQ4 531 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 MT-CO1P00395 513 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 MT-CO3P00414 261 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 MTIF2P46199 727 aaKnown RBP11.88□□□□□ -0.51
TUBB3-204ENST00000554116 CENPCQ03188 943 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 SFSWAPQ12872 951 aaKnown RBP11.88□□□□□ -0.51
TUBB3-204ENST00000554116 ZNF211Q13398 564 aaPredicted RBP11.88□□□□□ -0.51
TUBB3-204ENST00000554116 SLC12A1Q13621 1099 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 STILQ15468 1287 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 DPCR1Q3MIW9 517 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 TAF1BQ53T94 588 aaPredicted RBP11.88□□□□□ -0.51
TUBB3-204ENST00000554116 FBXL22Q6P050 247 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 C14orf80Q86SX3 495 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 TMEM110Q86TL2 294 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 PRPF39Q86UA1 669 aaKnown RBP11.88□□□□□ -0.51
TUBB3-204ENST00000554116 CHSY1Q86X52 802 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 IRF2BP1Q8IU81 584 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 SLC22A18ASQ8N1D0 253 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 OXR1Q8N573 874 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 WDTC1Q8N5D0 677 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 KLK6Q92876 244 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 FAM149B1Q96BN6 582 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 WBP1Q96G27 269 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 BTN2A3PQ96KV6 586 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 DDX50Q9BQ39 737 aaKnown RBP11.88□□□□□ -0.51
TUBB3-204ENST00000554116 FEM1AQ9BSK4 669 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 UBE2TQ9NPD8 197 aaPredicted RBP11.88□□□□□ -0.51
TUBB3-204ENST00000554116 ANLNQ9NQW6 1124 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 ZFR2Q9UPR6 939 aaKnown RBP11.88□□□□□ -0.51
TUBB3-204ENST00000554116 DMTF1Q9Y222 760 aa11.88□□□□□ -0.51
TUBB3-204ENST00000554116 DOCK4Q8N1I0 1966 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 A0A1B0GVM2 712 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 GOLGA6L22H0YM25 854 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 MCF2LO15068 1137 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 CASC3O15234 703 aaKnown RBP11.87□□□□□ -0.51
TUBB3-204ENST00000554116 SLC7A4O43246 635 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 MOCS3O95396 460 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 PRLRP16471 622 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 ERCC5P28715 1186 aaPredicted RBP11.87□□□□□ -0.51
TUBB3-204ENST00000554116 ACTN2P35609 894 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 GGCXP38435 758 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 CXADRP78310 365 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 RHDQ02161 417 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
TUBB3-204ENST00000554116 OVGP1Q12889 678 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 DLG2Q15700 870 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 ZNF284Q2VY69 593 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 OTUD1Q5VV17 481 aaPredicted RBP11.87□□□□□ -0.51
TUBB3-204ENST00000554116 KDM7AQ6ZMT4 941 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 GBP6Q6ZN66 633 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 Q6ZVU0 165 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 OR4C6Q8NH72 309 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 GPT2Q8TD30 523 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 STK32AQ8WU08 396 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 ARRDC3Q96B67 414 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 PSMB7Q99436 277 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 CRACR2AQ9BSW2 395 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 THAP9Q9H5L6 903 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 CLMPQ9H6B4 373 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 POPDC2Q9HBU9 364 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms