RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 F5H5T6 163 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 RNF225M0QZC1 329 aaPredicted RBP9.11□□□□□ -0.95
TDP1-208ENST00000553989 WNT1P04628 370 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 TUBBP07437 444 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 PDGFRAP16234 1089 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 ZNF18P17022 549 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 GOT1P17174 413 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 TACR2P21452 398 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 C5AR1P21730 350 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 ACADSBP45954 432 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 STK19P49842 368 aaPredicted RBP9.11□□□□□ -0.95
TDP1-208ENST00000553989 ADPRHP54922 357 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 CLDN6P56747 220 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 MCCD1P59942 119 aaPredicted RBP9.11□□□□□ -0.95
TDP1-208ENST00000553989 CBX1P83916 185 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 SEMG2Q02383 582 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 DMTNQ08495 405 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 NNTQ13423 1086 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 ELAVL3Q14576 367 aaKnown RBP9.11□□□□□ -0.95
TDP1-208ENST00000553989 ACCSLQ4AC99 568 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 DCAF6Q58WW2 860 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 C9orf64Q5T6V5 341 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 ISM2Q6H9L7 571 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 KLHL10Q6JEL2 608 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.11□□□□□ -0.95
TDP1-208ENST00000553989 SCUBE3Q8IX30 993 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 KDM1BQ8NB78 822 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 UBXN4Q92575 508 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 RNF34Q969K3 372 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 AZIN2Q96A70 460 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 MYEOVQ96EZ4 313 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 MRGPRX3Q96LB0 322 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 ZSWIM1Q9BR11 485 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 ORAI3Q9BRQ5 295 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 HSD3B7Q9H2F3 369 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 FAM204AQ9H8W3 233 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 COX16Q9P0S2 106 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 SLC12A6Q9UHW9 1150 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 XPO7Q9UIA9 1087 aaKnown RBP9.11□□□□□ -0.95
TDP1-208ENST00000553989 SLCO3A1Q9UIG8 710 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 PCDHGA1Q9Y5H4 931 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 APC2O95996 2303 aa9.11□□□□□ -0.95
TDP1-208ENST00000553989 GOLGA4Q13439 2230 aaKnown RBP9.11□□□□□ -0.95
TDP1-208ENST00000553989 FREM2Q5SZK8 3169 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 KNL1Q8NG31 2342 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 A0A087WV48 116 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 USP27XA6NNY8 438 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 EFCAB8A8MWE9 144 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 AKR1B15C9JRZ8 316 aaPredicted RBP9.1□□□□□ -0.95
TDP1-208ENST00000553989 E9PAM4 449 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 TLR4O00206 839 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 RRP8O43159 456 aaKnown RBP9.1□□□□□ -0.95
TDP1-208ENST00000553989 PAPSS1O43252 624 aaPredicted RBP9.1□□□□□ -0.95
TDP1-208ENST00000553989 MED7O43513 233 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 BNIP3LO60238 219 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 CDK4P11802 303 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 ATP1A3P13637 1013 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 MZF1P28698 734 aaPredicted RBP9.1□□□□□ -0.95
TDP1-208ENST00000553989 EPHA8P29322 1005 aaPredicted RBP9.1□□□□□ -0.95
TDP1-208ENST00000553989 MAT2AP31153 395 aaKnown RBP9.1□□□□□ -0.95
TDP1-208ENST00000553989 CASQ1P31415 396 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 CCR5P51681 352 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 PPP2CBP62714 309 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 PPP2CAP67775 309 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 SULT2A1Q06520 285 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 POM121L1PQ3SYA9 428 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 COBLL1Q53SF7 1204 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 ZC3H12AQ5D1E8 599 aaKnown RBP9.1□□□□□ -0.95
TDP1-208ENST00000553989 RABGAP1LQ5R372 815 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 HES3Q5TGS1 186 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 SYT10Q6XYQ8 523 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 DSG4Q86SJ6 1040 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 PRPF39Q86UA1 669 aaKnown RBP9.1□□□□□ -0.95
TDP1-208ENST00000553989 CIR1Q86X95 450 aaPredicted RBP9.1□□□□□ -0.95
TDP1-208ENST00000553989 ARHGEF19Q8IW93 802 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 APCDD1Q8J025 514 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 KRT222Q8N1A0 295 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 OXR1Q8N573 874 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 AADATQ8N5Z0 425 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 ATP6V0D2Q8N8Y2 350 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 MNS1Q8NEH6 495 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 SAP25Q8TEE9 199 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 OR8D1Q8WZ84 308 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 CRELD1Q96HD1 420 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 LMLNQ96KR4 655 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 BTN2A3PQ96KV6 586 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 CEP63Q96MT8 703 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 EBF2Q9HAK2 575 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 POPDC2Q9HBU9 364 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 ADAMTS1Q9UHI8 967 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 SLC25A13Q9UJS0 675 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 TPX2Q9ULW0 747 aaKnown RBP9.1□□□□□ -0.95
TDP1-208ENST00000553989 CABIN1Q9Y6J0 2220 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 PLXNA2O75051 1894 aa9.1□□□□□ -0.95
TDP1-208ENST00000553989 FASNP49327 2511 aaKnown RBP9.09□□□□□ -0.95
TDP1-208ENST00000553989 ITIH6Q6UXX5 1313 aa9.09□□□□□ -0.95
TDP1-208ENST00000553989 DSPP15924 2871 aaKnown RBP9.09□□□□□ -0.95
TDP1-208ENST00000553989 URB1O60287 2271 aaKnown RBP9.09□□□□□ -0.95
TDP1-208ENST00000553989 A0A1B0GTH6 734 aa9.09□□□□□ -0.95
TDP1-208ENST00000553989 A0A1W2PR77 199 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms