RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ANXA9O76027 345 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 CNTN5O94779 1100 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 MOCS2O96007 188 aaPredicted RBP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 CKMP06732 381 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 OR1E1P30953 314 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 CD68P34810 354 aaPredicted RBP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 HSD17B3P37058 310 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 CSNK1DP48730 415 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 PAPOLAP51003 745 aaKnown RBP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 PMS2P54278 862 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 MRPS25P82663 173 aaKnown RBP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 GNA12Q03113 381 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 NSUN2Q08J23 767 aaKnown RBP eCLIP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 POLD3Q15054 466 aaPredicted RBP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 UAP1Q16222 522 aaPredicted RBP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 TNFAIP8L3Q5GJ75 292 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 LRRC8BQ6P9F7 803 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 ARHGEF18Q6ZSZ5 1173 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 ADGRD2Q7Z7M1 963 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 LINC00523Q86TU6 105 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 TDRPQ86YL5 185 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 LGI2Q8N0V4 545 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 CELF5Q8N6W0 485 aaKnown RBP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 MAB21L3Q8N8X9 362 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 PEX13Q92968 403 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 USP13Q92995 863 aaPredicted RBP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 TMA16Q96EY4 203 aaKnown RBP11.12□□□□□ -0.63
PABPN1-203ENST00000553960 RBM15Q96T37 977 aaKnown RBP eCLIP11.12□□□□□ -0.631e-11■□□□□ 9.2
PABPN1-203ENST00000553960 FAM118BQ9BPY3 351 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 SLC25A51Q9H1U9 297 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 ETNK1Q9HBU6 452 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 RAB6BQ9NRW1 208 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 GKN1Q9NS71 199 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 NDFIP2Q9NV92 336 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 MPP6Q9NZW5 540 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 TEX264Q9Y6I9 313 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 C2orf16Q68DN1 1984 aa11.12□□□□□ -0.63
PABPN1-203ENST00000553960 DENND4AQ7Z401 1863 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.11□□□□□ -0.63
PABPN1-203ENST00000553960 LEFTY2O00292 366 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 TRDMT1O14717 391 aaKnown RBP11.11□□□□□ -0.63
PABPN1-203ENST00000553960 RIPK2O43353 540 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 TMEM63AO94886 807 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 LUC7L3O95232 432 aaKnown RBP11.11□□□□□ -0.63
PABPN1-203ENST00000553960 METTL18O95568 372 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 ZSCAN5DPP0CG00 497 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 MYL4P12829 197 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 ETS1P14921 441 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 PSMA3P25788 255 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 AVPR1AP37288 418 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 MMP13P45452 471 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 AP1B1Q10567 949 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 ILF2Q12905 390 aaKnown RBP11.11□□□□□ -0.63
PABPN1-203ENST00000553960 GPS2Q13227 327 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 ZNF177Q13360 481 aaPredicted RBP11.11□□□□□ -0.63
PABPN1-203ENST00000553960 MPP3Q13368 585 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 SLC5A9Q2M3M2 681 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 CCDC38Q502W7 563 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 GPR158Q5T848 1215 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 GPR153Q6NV75 609 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 CAND1Q86VP6 1230 aaKnown RBP11.11□□□□□ -0.63
PABPN1-203ENST00000553960 MICALL1Q8N3F8 863 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 RIBC1Q8N443 379 aaPredicted RBP11.11□□□□□ -0.63
PABPN1-203ENST00000553960 DCAF4L2Q8NA75 395 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 CCNYQ8ND76 341 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 CCDC110Q8TBZ0 833 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 SMG7Q92540 1137 aaKnown RBP11.11□□□□□ -0.63
PABPN1-203ENST00000553960 ISG20Q96AZ6 181 aaKnown RBP11.11□□□□□ -0.63
PABPN1-203ENST00000553960 PGM2Q96G03 612 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 IMP4Q96G21 291 aaKnown RBP11.11□□□□□ -0.63
PABPN1-203ENST00000553960 CYP2S1Q96SQ9 504 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 TRIM31Q9BZY9 425 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 LRRC40Q9H9A6 602 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 GLOD4Q9HC38 313 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 ATP13A1Q9HD20 1204 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 RIMKLBQ9ULI2 386 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 SNX10Q9Y5X0 201 aa11.11□□□□□ -0.63
PABPN1-203ENST00000553960 EPOPA6NHQ4 379 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 AGPSO00116 658 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 OPA1O60313 960 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 ALDH1A2O94788 518 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 GLP2RO95838 553 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 CR2P20023 1033 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 ADRA1AP35348 466 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 MAGEA4P43358 317 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 NRIP1P48552 1158 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 NPY2RP49146 381 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 IRAK1P51617 712 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 RPS24P62847 133 aaKnown RBP11.1□□□□□ -0.63
PABPN1-203ENST00000553960 CYP4F8P98187 520 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 HYAL1Q12794 435 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 ZBTB17Q13105 803 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 STAT4Q14765 748 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 DNAJC21Q5F1R6 531 aaKnown RBP11.1□□□□□ -0.63
PABPN1-203ENST00000553960 MARC1Q5VT66 337 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 STEAP4Q687X5 459 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 NAPEPLDQ6IQ20 393 aa11.1□□□□□ -0.63
PABPN1-203ENST00000553960 ANKRD54Q6NXT1 300 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms