RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 GRK6P43250 576 aa2.58□□□□□ -2
SRP54-204ENST00000553923 CXCR3P49682 368 aa2.58□□□□□ -2
SRP54-204ENST00000553923 TAF6P49848 677 aa2.58□□□□□ -2
SRP54-204ENST00000553923 TERF1P54274 439 aa2.58□□□□□ -2
SRP54-204ENST00000553923 NUCB1Q02818 461 aa2.58□□□□□ -2
SRP54-204ENST00000553923 DSC1Q08554 894 aa2.58□□□□□ -2
SRP54-204ENST00000553923 TRAF3Q13114 568 aa2.58□□□□□ -2
SRP54-204ENST00000553923 TBX2Q13207 712 aaPredicted RBP2.58□□□□□ -2
SRP54-204ENST00000553923 SEMA5AQ13591 1074 aa2.58□□□□□ -2
SRP54-204ENST00000553923 STARD3Q14849 445 aa2.58□□□□□ -2
SRP54-204ENST00000553923 KRT72Q14CN4 511 aa2.58□□□□□ -2
SRP54-204ENST00000553923 TMEM196Q5HYL7 178 aa2.58□□□□□ -2
SRP54-204ENST00000553923 HYIQ5T013 277 aa2.58□□□□□ -2
SRP54-204ENST00000553923 FNBP1LQ5T0N5 605 aa2.58□□□□□ -2
SRP54-204ENST00000553923 ABLIM2Q6H8Q1 611 aa2.58□□□□□ -2
SRP54-204ENST00000553923 CYB5RLQ6IPT4 315 aa2.58□□□□□ -2
SRP54-204ENST00000553923 FAM180BQ6P0A1 224 aa2.58□□□□□ -2
SRP54-204ENST00000553923 CADM3Q8N126 398 aa2.58□□□□□ -2
SRP54-204ENST00000553923 RFLNBQ8N5W9 214 aa2.58□□□□□ -2
SRP54-204ENST00000553923 OR2C3Q8N628 320 aa2.58□□□□□ -2
SRP54-204ENST00000553923 OVCA2Q8WZ82 227 aa2.58□□□□□ -2
SRP54-204ENST00000553923 MSLNLQ96KJ4 702 aa2.58□□□□□ -2
SRP54-204ENST00000553923 SNX22Q96L94 193 aa2.58□□□□□ -2
SRP54-204ENST00000553923 NODALQ96S42 347 aa2.58□□□□□ -2
SRP54-204ENST00000553923 WDR77Q9BQA1 342 aaPredicted RBP2.58□□□□□ -2
SRP54-204ENST00000553923 TRIM2Q9C040 744 aa2.58□□□□□ -2
SRP54-204ENST00000553923 NUP62CLQ9H1M0 184 aa2.58□□□□□ -2
SRP54-204ENST00000553923 FZD10Q9ULW2 581 aa2.58□□□□□ -2
SRP54-204ENST00000553923 ERI2A8K979 691 aaKnown RBP2.57□□□□□ -2
SRP54-204ENST00000553923 BMPR1BO00238 502 aa2.57□□□□□ -2
SRP54-204ENST00000553923 NEURL1O76050 574 aa2.57□□□□□ -2
SRP54-204ENST00000553923 MBD4O95243 580 aa2.57□□□□□ -2
SRP54-204ENST00000553923 ANXA2P07355 339 aaKnown RBP2.57□□□□□ -2
SRP54-204ENST00000553923 SNRNP70P08621 437 aaKnown RBP2.57□□□□□ -2
SRP54-204ENST00000553923 IFIT1P09914 478 aaKnown RBP2.57□□□□□ -2
SRP54-204ENST00000553923 HSD3B1P14060 373 aa2.57□□□□□ -2
SRP54-204ENST00000553923 DRD1P21728 446 aa2.57□□□□□ -2
SRP54-204ENST00000553923 MCCP23508 829 aa2.57□□□□□ -2
SRP54-204ENST00000553923 SLC8A1P32418 973 aa2.57□□□□□ -2
SRP54-204ENST00000553923 COPB2P35606 906 aa2.57□□□□□ -2
SRP54-204ENST00000553923 TECP42680 631 aa2.57□□□□□ -2
SRP54-204ENST00000553923 GLIPR1P48060 266 aa2.57□□□□□ -2
SRP54-204ENST00000553923 TM4SF4P48230 202 aa2.57□□□□□ -2
SRP54-204ENST00000553923 PMS2P54278 862 aa2.57□□□□□ -2
SRP54-204ENST00000553923 POLE2P56282 527 aa2.57□□□□□ -2
SRP54-204ENST00000553923 ICA1Q05084 483 aa2.57□□□□□ -2
SRP54-204ENST00000553923 BLMHQ13867 455 aa2.57□□□□□ -2
SRP54-204ENST00000553923 GPR18Q14330 331 aa2.57□□□□□ -2
SRP54-204ENST00000553923 DUSP6Q16828 381 aa2.57□□□□□ -2
SRP54-204ENST00000553923 FAM209BQ5JX69 171 aa2.57□□□□□ -2
SRP54-204ENST00000553923 CEP85LQ5SZL2 805 aa2.57□□□□□ -2
SRP54-204ENST00000553923 DCAF12L2Q5VW00 463 aa2.57□□□□□ -2
SRP54-204ENST00000553923 FAAH2Q6GMR7 532 aa2.57□□□□□ -2
SRP54-204ENST00000553923 C8orf82Q6P1X6 216 aaPredicted RBP2.57□□□□□ -2
SRP54-204ENST00000553923 CREB3L2Q70SY1 520 aa2.57□□□□□ -2
SRP54-204ENST00000553923 H1FNTQ75WM6 255 aaPredicted RBP2.57□□□□□ -2
SRP54-204ENST00000553923 RNF44Q7L0R7 432 aa2.57□□□□□ -2
SRP54-204ENST00000553923 DPP9Q86TI2 863 aa2.57□□□□□ -2
SRP54-204ENST00000553923 ANKRD18AQ8IVF6 992 aa2.57□□□□□ -2
SRP54-204ENST00000553923 SPEM1Q8N4L4 309 aa2.57□□□□□ -2
SRP54-204ENST00000553923 ZNF527Q8NB42 609 aa2.57□□□□□ -2
SRP54-204ENST00000553923 KDM1BQ8NB78 822 aa2.57□□□□□ -2
SRP54-204ENST00000553923 GCC1Q96CN9 775 aa2.57□□□□□ -2
SRP54-204ENST00000553923 ERP27Q96DN0 273 aa2.57□□□□□ -2
SRP54-204ENST00000553923 RTP4Q96DX8 246 aa2.57□□□□□ -2
SRP54-204ENST00000553923 TBATAQ96M53 351 aa2.57□□□□□ -2
SRP54-204ENST00000553923 CENPOQ9BU64 300 aa2.57□□□□□ -2
SRP54-204ENST00000553923 SLC26A6Q9BXS9 759 aa2.57□□□□□ -2
SRP54-204ENST00000553923 BTBD1Q9H0C5 482 aa2.57□□□□□ -2
SRP54-204ENST00000553923 IL25Q9H293 177 aa2.57□□□□□ -2
SRP54-204ENST00000553923 HEYLQ9NQ87 328 aaPredicted RBP2.57□□□□□ -2
SRP54-204ENST00000553923 LRFN1Q9P244 771 aa2.57□□□□□ -2
SRP54-204ENST00000553923 POLG2Q9UHN1 485 aa2.57□□□□□ -2
SRP54-204ENST00000553923 LRRFIP2Q9Y608 721 aaKnown RBP2.57□□□□□ -2
SRP54-204ENST00000553923 A0A087WV62 115 aa2.56□□□□□ -2
SRP54-204ENST00000553923 PLSCR5A0PG75 271 aa2.56□□□□□ -2
SRP54-204ENST00000553923 A6NCN8 305 aa2.56□□□□□ -2
SRP54-204ENST00000553923 POM121BA6NF01 834 aa2.56□□□□□ -2
SRP54-204ENST00000553923 EIF3FO00303 357 aaPredicted RBP2.56□□□□□ -2
SRP54-204ENST00000553923 NCAM2O15394 837 aa2.56□□□□□ -2
SRP54-204ENST00000553923 KAT7O95251 611 aa2.56□□□□□ -2
SRP54-204ENST00000553923 F7P08709 466 aaPredicted RBP2.56□□□□□ -2
SRP54-204ENST00000553923 ALADP13716 330 aa2.56□□□□□ -2
SRP54-204ENST00000553923 ITGB8P26012 769 aa2.56□□□□□ -2
SRP54-204ENST00000553923 CNTFP26441 200 aa2.56□□□□□ -2
SRP54-204ENST00000553923 ATICP31939 592 aa2.56□□□□□ -2
SRP54-204ENST00000553923 STT3AP46977 705 aa2.56□□□□□ -2
SRP54-204ENST00000553923 ZP1P60852 638 aa2.56□□□□□ -2
SRP54-204ENST00000553923 GRSF1Q12849 480 aaKnown RBP eCLIP2.56□□□□□ -2
SRP54-204ENST00000553923 GPS1Q13098 491 aa2.56□□□□□ -2
SRP54-204ENST00000553923 PPFIA1Q13136 1202 aa2.56□□□□□ -2
SRP54-204ENST00000553923 SEMA3BQ13214 749 aa2.56□□□□□ -2
SRP54-204ENST00000553923 BFSP2Q13515 415 aa2.56□□□□□ -2
SRP54-204ENST00000553923 TAF5Q15542 800 aa2.56□□□□□ -2
SRP54-204ENST00000553923 KIF19Q2TAC6 998 aa2.56□□□□□ -2
SRP54-204ENST00000553923 TDRD12Q587J7 1177 aaKnown RBP2.56□□□□□ -2
SRP54-204ENST00000553923 ENTPD8Q5MY95 495 aa2.56□□□□□ -2
SRP54-204ENST00000553923 DNTTIP2Q5QJE6 756 aaKnown RBP2.56□□□□□ -2
SRP54-204ENST00000553923 OTUD1Q5VV17 481 aaPredicted RBP2.56□□□□□ -2
SRP54-204ENST00000553923 IZUMO3Q5VZ72 239 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms