RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 TRIP10Q15642 601 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 CCDC153Q494R4 210 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 WSCD1Q658N2 575 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 TMEM198Q66K66 360 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 CWF19L1Q69YN2 538 aaKnown RBP7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 ACAD11Q709F0 780 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 KCNMB4Q86W47 210 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 PSTKQ8IV42 348 aaKnown RBP7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 TMEM151AQ8N4L1 468 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 SHCBP1Q8NEM2 672 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 PPP2R3CQ969Q6 453 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 VPS39Q96JC1 886 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZFP42Q96MM3 310 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZNF560Q96MR9 790 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 TRAPPC9Q96Q05 1148 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 HNRNPABQ99729 332 aaKnown RBP7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 GBA3Q9H227 469 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 CRTAC1Q9NQ79 661 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZDHHC7Q9NXF8 308 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 ADAM28Q9UKQ2 775 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 PCDHGB4Q9UN71 923 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 PCDHGB5Q9Y5G0 923 aa7.07□□□□□ -1.28
LINC-ROR-201ENST00000553704 NYNRINQ9P2P1 1898 aaKnown RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 PTGESO14684 152 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 MYCNP04198 464 aaPredicted RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 HOXD8P13378 290 aaPredicted RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 ETS2P15036 469 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 PIK3R1P27986 724 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 SERPINB6P35237 376 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 SPRP35270 261 aaPredicted RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 ADRA1BP35368 520 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 MSX2P35548 267 aaPredicted RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 DPP6P42658 865 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 CSRP3P50461 194 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 NUDT2P50583 147 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 CDK7P50613 346 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 POLE2P56282 527 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 TPI1P60174 286 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 PPIDQ08752 370 aaKnown RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 MPP3Q13368 585 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 C11orf91Q3C1V1 193 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 CFAP157Q5JU67 520 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 ARHGAP36Q6ZRI8 547 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 SNX32Q86XE0 403 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 APLFQ8IW19 511 aaPredicted RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 MFSD6LQ8IWD5 586 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 SIX6OS1Q8N1H7 587 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 GALNT15Q8N3T1 639 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 FBXW8Q8N3Y1 598 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZMIZ2Q8NF64 920 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 DNAJB3Q8WWF6 145 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 CMTM5Q96DZ9 223 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 CELF6Q96J87 481 aaKnown RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 KCNK16Q96T55 309 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 C1QTNF1Q9BXJ1 281 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 NMRAL1Q9HBL8 299 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 TCF7L2Q9NQB0 619 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 C20orf96Q9NUD7 363 aaPredicted RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 PDP2Q9P2J9 529 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 SLC39A10Q9ULF5 831 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 STAP1Q9ULZ2 295 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 SSX2IPQ9Y2D8 614 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 COL4A4P53420 1690 aaPredicted RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 TMEM233B4DJY2 109 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 AIM2O14862 343 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 GRID2O43424 1007 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 HUS1O60921 280 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 USP17L7P0C7H9 530 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 CYP2C9P11712 490 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 MYL4P12829 197 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 PTPN1P18031 435 aaKnown RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 WARSP23381 471 aaKnown RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 GABRB3P28472 473 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 AFF1P51825 1210 aaKnown RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 THOP1P52888 689 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 DAOAP59103 153 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 MPP1Q00013 466 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 NSUN2Q08J23 767 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 SNX17Q15036 470 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 EML3Q32P44 896 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 SV2CQ496J9 727 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 DUSP28Q4G0W2 176 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 OTOP3Q7RTS5 596 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 BHLHA9Q7RTU4 235 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 KBTBD6Q86V97 674 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 CENPLQ8N0S6 344 aaPredicted RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 SPATA6LQ8N4H0 392 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 SMG8Q8ND04 991 aaKnown RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 USP33Q8TEY7 942 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 KCTD4Q8WVF5 259 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 EDEM1Q92611 657 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 JADE3Q92613 823 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 DPF3Q92784 378 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 TNIP3Q96KP6 325 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 GBP5Q96PP8 586 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 SMOQ99835 787 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 MED10Q9BTT4 135 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 ACE2Q9BYF1 805 aaPredicted RBP7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 NUF2Q9BZD4 464 aa7.06□□□□□ -1.28
LINC-ROR-201ENST00000553704 KLHL4Q9C0H6 718 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms