RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 DR1Q01658 176 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 SLC14A1Q13336 389 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 PLEKHG6Q3KR16 790 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 C10orf120Q5SQS8 335 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 ALS2CLQ60I27 953 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 TADA2BQ86TJ2 420 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 RGL4Q8IZJ4 473 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 MREGQ8N565 214 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 OR2I1PQ8NGU4 316 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 ZCCHC14Q8WYQ9 949 aaKnown RBP16.51■□□□□ 0.23
ACTN1-209ENST00000553659 SEC14L1Q92503 715 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 FOXJ1Q92949 421 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 RBM41Q96IZ5 413 aaKnown RBP16.51■□□□□ 0.23
ACTN1-209ENST00000553659 SLC6A17Q9H1V8 727 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 CD93Q9NPY3 652 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 PLK2Q9NYY3 685 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 SUSD2Q9UGT4 822 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 PCYOX1Q9UHG3 505 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 FEZ2Q9UHY8 353 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-209ENST00000553659 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.51■□□□□ 0.23
ACTN1-209ENST00000553659 ZNF510Q9Y2H8 683 aa16.51■□□□□ 0.23
ACTN1-209ENST00000553659 CKAP5Q14008 2032 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 TCRBV5S1A1TA0A578 114 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 CALCAP01258 141 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 PYGMP11217 842 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 GNSP15586 552 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 DRG2P55039 364 aaKnown RBP16.5■□□□□ 0.23
ACTN1-209ENST00000553659 COPS2P61201 443 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 GABPB1Q06547 395 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-209ENST00000553659 ZNF211Q13398 564 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-209ENST00000553659 ACAP1Q15027 740 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 ZNF423Q2M1K9 1284 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 LCLAT1Q6UWP7 414 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 KIAA1324Q6UXG2 1013 aaKnown RBP16.5■□□□□ 0.23
ACTN1-209ENST00000553659 SYDE1Q6ZW31 735 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-209ENST00000553659 SND1Q7KZF4 910 aaKnown RBP eCLIP16.5■□□□□ 0.23
ACTN1-209ENST00000553659 SCD5Q86SK9 330 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 METTL3Q86U44 580 aaKnown RBP16.5■□□□□ 0.23
ACTN1-209ENST00000553659 EXD1Q8NHP7 514 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 TFAP2BQ92481 460 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 BHMTQ93088 406 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 LRRC45Q96CN5 670 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 C18orf8Q96DM3 657 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 BTBD6Q96KE9 485 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 DUSP16Q9BY84 665 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 DDX47Q9H0S4 455 aaKnown RBP16.5■□□□□ 0.23
ACTN1-209ENST00000553659 SYNCQ9H7C4 482 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 DDX56Q9NY93 547 aaKnown RBP16.5■□□□□ 0.23
ACTN1-209ENST00000553659 CLIC5Q9NZA1 410 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 SLC27A6Q9Y2P4 619 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 USP3Q9Y6I4 520 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 STON1Q9Y6Q2 735 aa16.5■□□□□ 0.23
ACTN1-209ENST00000553659 SIGLEC16A6NMB1 481 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 O00370 1275 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 NPC1O15118 1278 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 GJB3O75712 270 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 PENKP01210 267 aaPredicted RBP16.49■□□□□ 0.23
ACTN1-209ENST00000553659 KLKB1P03952 638 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 RALAP11233 206 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 DESP17661 470 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 CD6P30203 668 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 CHKAP35790 457 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 GABRB2P47870 512 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 COG7P83436 770 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 CBX1P83916 185 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 WDR45BQ5MNZ6 344 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 PPP1R15BQ5SWA1 713 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 DENND1BQ6P3S1 775 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 CHCHD4Q8N4Q1 142 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 FAM71BQ8TC56 605 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 GRK7Q8WTQ7 553 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 P2RY11Q96G91 374 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 HEXIM2Q96MH2 286 aaKnown RBP16.49■□□□□ 0.23
ACTN1-209ENST00000553659 CDK5RAP1Q96SZ6 601 aaKnown RBP16.49■□□□□ 0.23
ACTN1-209ENST00000553659 NCAPGQ9BPX3 1015 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 PRDM16Q9HAZ2 1276 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 ITM2CQ9NQX7 267 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 THAP10Q9P2Z0 257 aaPredicted RBP16.49■□□□□ 0.23
ACTN1-209ENST00000553659 HPCAL4Q9UM19 191 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 PLXNB3Q9ULL4 1909 aa16.49■□□□□ 0.23
ACTN1-209ENST00000553659 IGF2RP11717 2491 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 M0QYV0 167 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 SH3BP5O60239 455 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 MAOBP27338 520 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 MARCKSL1P49006 195 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 ENPP2Q13822 863 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 STARD3Q14849 445 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 TRIP6Q15654 476 aaKnown RBP16.48■□□□□ 0.23
ACTN1-209ENST00000553659 FUT11Q495W5 492 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 PPP1R26Q5T8A7 1209 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-209ENST00000553659 ARHGAP17Q68EM7 881 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 POLNQ7Z5Q5 900 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 RAB44Q7Z6P3 723 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-209ENST00000553659 RCOR2Q8IZ40 523 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 WDTC1Q8N5D0 677 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 UCMAQ8WVF2 138 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 CASKIN2Q8WXE0 1202 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 IFT81Q8WYA0 676 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 DNASE2BQ8WZ79 361 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 SLCO2A1Q92959 643 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms