RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 CCDC66A2RUB6 948 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 ZSCAN5CA6NGD5 496 aaPredicted RBP14.16□□□□□ -0.14
TUBB3-202ENST00000553656 WASH3PC4AMC7 463 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 RASA4BC9J798 803 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 ZSCAN12O43309 604 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 RASA4O43374 803 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 SNAP91O60641 907 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 STK19P49842 368 aaPredicted RBP14.16□□□□□ -0.14
TUBB3-202ENST00000553656 CLCN6P51797 869 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 NRLP54845 237 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 SLC20A2Q08357 652 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 ACCSLQ4AC99 568 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 ANKRD20A8PQ5CZ79 823 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 VSIG1Q86XK7 387 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 CCDC50Q8IVM0 306 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 KATNAL2Q8IYT4 538 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 UBL4BQ8N7F7 174 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 LRRC57Q8N9N7 239 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 RNF25Q96BH1 459 aaPredicted RBP14.16□□□□□ -0.14
TUBB3-202ENST00000553656 HMCESQ96FZ2 354 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 RBM41Q96IZ5 413 aaKnown RBP14.16□□□□□ -0.14
TUBB3-202ENST00000553656 CELF6Q96J87 481 aaKnown RBP14.16□□□□□ -0.14
TUBB3-202ENST00000553656 ACE2Q9BYF1 805 aaPredicted RBP14.16□□□□□ -0.14
TUBB3-202ENST00000553656 TMEM245Q9H330 911 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 KCNF1Q9H3M0 494 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 RAD54BQ9Y620 910 aa14.16□□□□□ -0.14
TUBB3-202ENST00000553656 EDDM13A0A1B0GTR0 161 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 MIF4GDA9UHW6 222 aaKnown RBP14.15□□□□□ -0.14
TUBB3-202ENST00000553656 ZNF487B1APH4 448 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 DFFAO00273 331 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 DCLK1O15075 740 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 KDELR3O43731 214 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 ZRANB2O95218 330 aaKnown RBP eCLIP14.15□□□□□ -0.14
TUBB3-202ENST00000553656 HLA-EP13747 358 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 CTNNA1P35221 906 aaKnown RBP14.15□□□□□ -0.14
TUBB3-202ENST00000553656 CETN2P41208 172 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 VASPP50552 380 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-202ENST00000553656 ENPP2Q13822 863 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 ANO7Q6IWH7 933 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 TSSK4Q6SA08 328 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 TMEM92Q6UXU6 159 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 LINGO4Q6UY18 593 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 METTL3Q86U44 580 aaKnown RBP14.15□□□□□ -0.14
TUBB3-202ENST00000553656 RFX6Q8HWS3 928 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 RCOR2Q8IZ40 523 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 PGBD3Q8N328 593 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 NPWQ8N729 165 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 ZNF366Q8N895 744 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 FAF2Q96CS3 445 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 MRGPRX3Q96LB0 322 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 CCDC114Q96M63 670 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 FAM126AQ9BYI3 521 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-202ENST00000553656 IRF2BPLQ9H1B7 796 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 KCNH6Q9H252 994 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 NOL6Q9H6R4 1146 aaKnown RBP14.15□□□□□ -0.14
TUBB3-202ENST00000553656 LRRC19Q9H756 370 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 FBRSQ9HAH7 460 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 PRDM16Q9HAZ2 1276 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 SP110Q9HB58 689 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 POLR3BQ9NW08 1133 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-202ENST00000553656 C2orf42Q9NWW7 574 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 SLCO3A1Q9UIG8 710 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 HS3ST2Q9Y278 367 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 PCDHA3Q9Y5H8 950 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 CAPN6Q9Y6Q1 641 aa14.15□□□□□ -0.14
TUBB3-202ENST00000553656 CXorf51AA0A1B0GTR3 108 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 TARSL2A2RTX5 802 aaKnown RBP14.14□□□□□ -0.15
TUBB3-202ENST00000553656 APOL1O14791 398 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 FTCDO95954 541 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 ZFXP17010 805 aaPredicted RBP14.14□□□□□ -0.15
TUBB3-202ENST00000553656 GLDCP23378 1020 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 IL4RP24394 825 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 CTNNA2P26232 953 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 RECQLP46063 649 aaPredicted RBP14.14□□□□□ -0.15
TUBB3-202ENST00000553656 SERPINH1P50454 418 aaKnown RBP14.14□□□□□ -0.15
TUBB3-202ENST00000553656 PAPOLAP51003 745 aaKnown RBP14.14□□□□□ -0.15
TUBB3-202ENST00000553656 RWDD2BP57060 319 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 ARF5P84085 180 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 SERINC3Q13530 473 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 TFDP2Q14188 446 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 HNRNPA1L2Q32P51 320 aaKnown RBP14.14□□□□□ -0.15
TUBB3-202ENST00000553656 ZNF528Q3MIS6 628 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 HEATR6Q6AI08 1181 aaKnown RBP14.14□□□□□ -0.15
TUBB3-202ENST00000553656 NT5DC3Q86UY8 548 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 SH2D3CQ8N5H7 860 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 ATPAF2Q8N5M1 289 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 EXD1Q8NHP7 514 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 PCDH19Q8TAB3 1148 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 UBE2Q2Q8WVN8 375 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 HMGB4Q8WW32 186 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 KRT35Q92764 455 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 ERLEC1Q96DZ1 483 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 RNF157Q96PX1 679 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 SLC39A8Q9C0K1 460 aa14.14□□□□□ -0.15
TUBB3-202ENST00000553656 FARP1Q9Y4F1 1045 aaPredicted RBP14.14□□□□□ -0.15
TUBB3-202ENST00000553656 A0A1W2PQF6 199 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 TTC34A8MYJ7 566 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 K7ESF4 209 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 ATP9BO43861 1147 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 BNIP3LO60238 219 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms