RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TPP1O14773 563 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 NVLO15381 856 aaKnown RBP14.22□□□□□ -0.13
PRPF39-204ENST00000553605 AQP9O43315 295 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 NME1P15531 152 aaKnown RBP14.22□□□□□ -0.13
PRPF39-204ENST00000553605 ZNF18P17022 549 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 WT1P19544 449 aaPredicted RBP14.22□□□□□ -0.13
PRPF39-204ENST00000553605 RPIAP49247 311 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 NUMBP49757 651 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 TBX4P57082 545 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 ADIGQ0VDE8 80 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 FZD2Q14332 565 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 DCAF6Q58WW2 860 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 MS4A13Q5J8X5 152 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 ARHGAP17Q68EM7 881 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 OR6B2Q6IFH4 312 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 MSANTD2Q6P1R3 559 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 HORMAD1Q86X24 394 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 SLC4A11Q8NBS3 891 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 GOLGA5Q8TBA6 731 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 TMC2Q8TDI7 906 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 GLMNQ92990 594 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 NAT6Q93015 286 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 IL12RB2Q99665 862 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 CCDC3Q9BQI4 270 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 DMAC2Q9NW81 257 aa14.22□□□□□ -0.13
PRPF39-204ENST00000553605 NTN3O00634 580 aaPredicted RBP14.21□□□□□ -0.13
PRPF39-204ENST00000553605 XPO1O14980 1071 aaKnown RBP14.21□□□□□ -0.13
PRPF39-204ENST00000553605 MCF2LO15068 1137 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 HGFP14210 728 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 CEBPZQ03701 1054 aaKnown RBP14.21□□□□□ -0.13
PRPF39-204ENST00000553605 SULT2A1Q06520 285 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 ACCSLQ4AC99 568 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 PIP5KL1Q5T9C9 394 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 CNNM4Q6P4Q7 775 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 PTAR1Q7Z6K3 402 aaPredicted RBP14.21□□□□□ -0.13
PRPF39-204ENST00000553605 B3GNT8Q7Z7M8 397 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 LMX1AQ8TE12 382 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 TATDN2Q93075 761 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 BMFQ96LC9 184 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 BOCQ9BWV1 1114 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 STRADBQ9C0K7 418 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 NUCKS1Q9H1E3 243 aaKnown RBP14.21□□□□□ -0.13
PRPF39-204ENST00000553605 SLC39A2Q9NP94 309 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 GPR27Q9NS67 375 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 PLEKHB1Q9UF11 243 aaPredicted RBP14.21□□□□□ -0.13
PRPF39-204ENST00000553605 KLF15Q9UIH9 416 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 ANAPC2Q9UJX6 822 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 PCDHB11Q9Y5F2 797 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 HS3ST3A1Q9Y663 406 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 RP1P56715 2156 aa14.21□□□□□ -0.13
PRPF39-204ENST00000553605 ANKRD17O75179 2603 aaKnown RBP14.2□□□□□ -0.14
PRPF39-204ENST00000553605 SPTY2D1-AS1A0A0U1RR47 76 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 TMX2-CTNND1H3BSU7 103 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 ALOX15BO15296 676 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 JMJD7P0C870 316 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 JUNDP17535 347 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 RAD23BP54727 409 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 KCNAB2Q13303 367 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 SLC12A1Q13621 1099 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 C1orf220Q5T0J3 134 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 BORAQ6PGQ7 559 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 UNC13DQ70J99 1090 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 PARGQ86W56 976 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 SLC9A9Q8IVB4 645 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 SLC35F3Q8IY50 421 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 SIX6OS1Q8N1H7 587 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 CCDC150Q8NCX0 1101 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 TAS1R2Q8TE23 839 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 C7orf25Q9BPX7 421 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 PISDQ9UG56 409 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 IPO11Q9UI26 975 aaKnown RBP14.2□□□□□ -0.14
PRPF39-204ENST00000553605 SRPK3Q9UPE1 567 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 SMC3Q9UQE7 1217 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 NBASA2RRP1 2371 aa14.2□□□□□ -0.14
PRPF39-204ENST00000553605 POM121BA6NF01 834 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 PCDH8O95206 1070 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 DAOAP59103 153 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 CCDC15Q0P6D6 951 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 E2F4Q16254 413 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 GOLGA7BQ2TAP0 167 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 ZFAND4Q86XD8 727 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 TTC39CQ8N584 583 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 TMEM174Q8WUU8 243 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 TMX3Q96JJ7 454 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 FOXP3Q9BZS1 431 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 CUEDC2Q9H467 287 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 CNGB3Q9NQW8 809 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 CISHQ9NSE2 258 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 PADI4Q9UM07 663 aa14.19□□□□□ -0.14
PRPF39-204ENST00000553605 ZFR2Q9UPR6 939 aaKnown RBP14.19□□□□□ -0.14
PRPF39-204ENST00000553605 ATP9BO43861 1147 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 BNIP3LO60238 219 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 LCP1P13796 627 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 PDGFRAP16234 1089 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 GCLMP48507 274 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 VASPP50552 380 aaPredicted RBP14.18□□□□□ -0.14
PRPF39-204ENST00000553605 VAMP7P51809 220 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 POLE2P56282 527 aa14.18□□□□□ -0.14
PRPF39-204ENST00000553605 BST2Q10589 180 aaKnown RBP14.18□□□□□ -0.14
PRPF39-204ENST00000553605 DLG2Q15700 870 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms