RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SND1Q7KZF4 910 aaKnown RBP eCLIP18.69■□□□□ 0.58
SHMT2-206ENST00000553529 IRF2BP2Q7Z5L9 587 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 LUZP1Q86V48 1076 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 FAM172AQ8WUF8 416 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 OMDQ99983 421 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 RRN3Q9NYV6 651 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 CA5BQ9Y2D0 317 aa18.69■□□□□ 0.58
SHMT2-206ENST00000553529 CNOT1A5YKK6 2376 aaKnown RBP18.68■□□□□ 0.58
SHMT2-206ENST00000553529 ATP9BO43861 1147 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 ZNF821O75541 412 aaPredicted RBP18.68■□□□□ 0.58
SHMT2-206ENST00000553529 GNSP15586 552 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 MAT2AP31153 395 aaKnown RBP18.68■□□□□ 0.58
SHMT2-206ENST00000553529 ZNF165P49910 485 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 ARF5P84085 180 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 CNTN1Q12860 1018 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 SLC12A1Q13621 1099 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 HLA-BQ31612 363 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 MANEALQ5VSG8 457 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 PHF13Q86YI8 300 aaPredicted RBP18.68■□□□□ 0.58
SHMT2-206ENST00000553529 KDM1BQ8NB78 822 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 ANKRD20A12PQ8NF67 263 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 OR14C36Q8NHC7 312 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 ARRDC3Q96B67 414 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 MCEEQ96PE7 176 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 SPON2Q9BUD6 331 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 TRIM7Q9C029 511 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 GAREM1Q9H706 876 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 DNAAF2Q9NVR5 837 aaKnown RBP18.68■□□□□ 0.58
SHMT2-206ENST00000553529 SLC25A13Q9UJS0 675 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 WASF3Q9UPY6 502 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 BTBD3Q9Y2F9 522 aa18.68■□□□□ 0.58
SHMT2-206ENST00000553529 C10orf142B7Z368 130 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 CBX4O00257 560 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 ZMPSTE24O75844 475 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 CD160O95971 181 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 F9P00740 461 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 KRT3P12035 628 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 SKILP12757 684 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 CSRP1P21291 193 aaKnown RBP18.67■□□□□ 0.58
SHMT2-206ENST00000553529 OR1E1P30953 314 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 SDC4P31431 198 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 GKP32189 559 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 ADRA1BP35368 520 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 ZBTB16Q05516 673 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 ELAVL3Q14576 367 aaKnown RBP18.67■□□□□ 0.58
SHMT2-206ENST00000553529 E2F5Q15329 346 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 SMYD5Q6GMV2 418 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 USP30Q70CQ3 517 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 ATP11CQ8NB49 1132 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 MSANTD4Q8NCY6 345 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 BPIFA3Q9BQP9 254 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 SELENOOQ9BVL4 669 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 FBRSQ9HAH7 460 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 SGK2Q9HBY8 427 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 CBX8Q9HC52 389 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 GPATCH2LQ9NWQ4 482 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 SUSD2Q9UGT4 822 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 DNAI1Q9UI46 699 aa18.67■□□□□ 0.58
SHMT2-206ENST00000553529 FCF1Q9Y324 198 aaKnown RBP18.67■□□□□ 0.58
SHMT2-206ENST00000553529 HYAL3O43820 417 aaPredicted RBP18.66■□□□□ 0.58
SHMT2-206ENST00000553529 LRIG2O94898 1065 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 SYPP08247 313 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 GPD1P21695 349 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 DPP6P42658 865 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 TAS2R38P59533 333 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 SIM1P81133 766 aaPredicted RBP18.66■□□□□ 0.58
SHMT2-206ENST00000553529 PPP1R15BQ5SWA1 713 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 AGBL4Q5VU57 503 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 RWDD4Q6NW29 188 aaKnown RBP18.66■□□□□ 0.58
SHMT2-206ENST00000553529 TRIM72Q6ZMU5 477 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 NLRP14Q86W24 1093 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 PNPLA1Q8N8W4 532 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 OR2A12Q8NGT7 310 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 OR6K2Q8NGY2 324 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 PIP4K2CQ8TBX8 421 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 GRIN3AQ8TCU5 1115 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 CENPIQ92674 756 aaPredicted RBP18.66■□□□□ 0.58
SHMT2-206ENST00000553529 KLK6Q92876 244 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 C1orf74Q96LT6 269 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 HAPLN3Q96S86 360 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 ZYG11BQ9C0D3 744 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 KLC2Q9H0B6 622 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 PPM1HQ9ULR3 514 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 NCKAP1Q9Y2A7 1128 aa18.66■□□□□ 0.58
SHMT2-206ENST00000553529 A0A1B0GTH6 734 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 H0Y8X5 98 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 RNASEH1O60930 286 aaKnown RBP18.65■□□□□ 0.58
SHMT2-206ENST00000553529 CEACAM1P13688 526 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 GOT1P17174 413 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 C5AR1P21730 350 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 CD27P26842 260 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 PTPN9P43378 593 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 SULT2A1Q06520 285 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 DNAJC24Q6P3W2 148 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 C22orf39Q6P5X5 142 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 LRRC31Q6UY01 552 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 ARCQ7LC44 396 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 ZNF571Q7Z3V5 609 aaPredicted RBP18.65■□□□□ 0.58
SHMT2-206ENST00000553529 NAXDQ8IW45 347 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 MCOLN2Q8IZK6 566 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms