RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 NDFIP2Q9NV92 336 aa18.9■□□□□ 0.62
CPSF2-202ENST00000553427 CTTNBP2NLQ9P2B4 639 aa18.9■□□□□ 0.62
CPSF2-202ENST00000553427 SCML1Q9UN30 329 aa18.9■□□□□ 0.62
CPSF2-202ENST00000553427 CHD5Q8TDI0 1954 aa18.9■□□□□ 0.62
CPSF2-202ENST00000553427 CREB3O43889 395 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 SNAP91O60641 907 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 MTA2O94776 668 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 LCA5LO95447 670 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 IL1R2P27930 398 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 OXTRP30559 389 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 MAN1A1P33908 653 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 HCAR3P49019 387 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 YBEYP58557 167 aaPredicted RBP18.89■□□□□ 0.61
CPSF2-202ENST00000553427 TPI1P60174 286 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 RPS14P62263 151 aaKnown RBP18.89■□□□□ 0.61
CPSF2-202ENST00000553427 SLC25A11Q02978 314 aaKnown RBP18.89■□□□□ 0.61
CPSF2-202ENST00000553427 TCEAL1Q15170 157 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 DPYSL2Q16555 572 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 CA9Q16790 459 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 RETSATQ6NUM9 610 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 LPCAT2Q7L5N7 544 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 UMODL1-AS1Q8N2C9 162 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 GPR161Q8N6U8 529 aaKnown RBP18.89■□□□□ 0.61
CPSF2-202ENST00000553427 PTPRN2Q92932 1015 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 ARHGEF2Q92974 986 aaKnown RBP18.89■□□□□ 0.61
CPSF2-202ENST00000553427 ERLEC1Q96DZ1 483 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 ATP13A1Q9HD20 1204 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 GPATCH2LQ9NWQ4 482 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 CYP8B1Q9UNU6 501 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 INVSQ9Y283 1065 aa18.89■□□□□ 0.61
CPSF2-202ENST00000553427 ALOX15BO15296 676 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 RNASEH1O60930 286 aaKnown RBP18.88■□□□□ 0.61
CPSF2-202ENST00000553427 PROSCO94903 275 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 SRCP12931 536 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 TPMTP51580 245 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 PARP15Q460N3 678 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 RHOT2Q8IXI1 618 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 RFFLQ8WZ73 363 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 BTBD6Q96KE9 485 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 KCTD15Q96SI1 283 aaPredicted RBP18.88■□□□□ 0.61
CPSF2-202ENST00000553427 CEP44Q9C0F1 390 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 MTG2Q9H4K7 406 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 NOL6Q9H6R4 1146 aaKnown RBP18.88■□□□□ 0.61
CPSF2-202ENST00000553427 IMPACTQ9P2X3 320 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 DNAI1Q9UI46 699 aa18.88■□□□□ 0.61
CPSF2-202ENST00000553427 ZSCAN5CA6NGD5 496 aaPredicted RBP18.87■□□□□ 0.61
CPSF2-202ENST00000553427 EEF2KO00418 725 aaKnown RBP18.87■□□□□ 0.61
CPSF2-202ENST00000553427 MAP3K13O43283 966 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 MT-CO1P00395 513 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 ACADMP11310 421 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 CD6P30203 668 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 ACVRL1P37023 503 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 SERPINH1P50454 418 aaKnown RBP18.87■□□□□ 0.61
CPSF2-202ENST00000553427 GEMIN4P57678 1058 aaKnown RBP18.87■□□□□ 0.61
CPSF2-202ENST00000553427 ARF5P84085 180 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 POLD3Q15054 466 aaPredicted RBP18.87■□□□□ 0.61
CPSF2-202ENST00000553427 DLG2Q15700 870 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 TTC31Q49AM3 519 aaPredicted RBP18.87■□□□□ 0.61
CPSF2-202ENST00000553427 RFX8Q6ZV50 586 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 USP30Q70CQ3 517 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 DSG4Q86SJ6 1040 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 FRMD1Q8N878 549 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 ATP11CQ8NB49 1132 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 FAM129BQ96TA1 746 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 SPON2Q9BUD6 331 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 PCED1AQ9H1Q7 454 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 PABPC3Q9H361 631 aaKnown RBP18.87■□□□□ 0.61
CPSF2-202ENST00000553427 CD93Q9NPY3 652 aa18.87■□□□□ 0.61
CPSF2-202ENST00000553427 WSB2Q9NYS7 404 aaPredicted RBP18.87■□□□□ 0.61
CPSF2-202ENST00000553427 CBX4O00257 560 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 FOXD2O60548 495 aaPredicted RBP18.86■□□□□ 0.61
CPSF2-202ENST00000553427 ADH1BP00325 375 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 DNTTP04053 509 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 TCF4P15884 667 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 TGM1P22735 817 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 GLDCP23378 1020 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 DPP6P42658 865 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 NUMBP49757 651 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 NDST2P52849 883 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 RPL6Q02878 288 aaKnown RBP18.86■□□□□ 0.61
CPSF2-202ENST00000553427 SFSWAPQ12872 951 aaKnown RBP18.86■□□□□ 0.61
CPSF2-202ENST00000553427 DPYSQ14117 519 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 CST6Q15828 149 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 HADHQ16836 314 aaKnown RBP18.86■□□□□ 0.61
CPSF2-202ENST00000553427 DAB2IPQ5VWQ8 1189 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 IL31Q6EBC2 164 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 TMTC1Q8IUR5 882 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 ISG20Q96AZ6 181 aaKnown RBP18.86■□□□□ 0.61
CPSF2-202ENST00000553427 CCDC114Q96M63 670 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 HINFPQ9BQA5 517 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 LRRC19Q9H756 370 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 ZWILCHQ9H900 591 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.86■□□□□ 0.61
CPSF2-202ENST00000553427 RCOR3Q9P2K3 495 aaPredicted RBP18.86■□□□□ 0.61
CPSF2-202ENST00000553427 HPCAL4Q9UM19 191 aa18.86■□□□□ 0.61
CPSF2-202ENST00000553427 NYNRINQ9P2P1 1898 aaKnown RBP18.86■□□□□ 0.61
CPSF2-202ENST00000553427 ABCA7Q8IZY2 2146 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 BCLAF3A2AJT9 711 aaKnown RBP18.85■□□□□ 0.61
CPSF2-202ENST00000553427 H3BRJ5 948 aa18.85■□□□□ 0.61
CPSF2-202ENST00000553427 MCF2LO15068 1137 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms