RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PLK4O00444 970 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 PMM2O15305 246 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 CDK4P11802 303 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 CCR1P32246 355 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 YWHAZP63104 245 aaKnown RBP10.21□□□□□ -0.77
ACTN1-208ENST00000553370 SEMG2Q02383 582 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 DNAJC3Q13217 504 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 NME3Q13232 169 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 SLC12A1Q13621 1099 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 ARHGAP44Q17R89 818 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 POM121L1PQ3SYA9 428 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 SETMARQ53H47 684 aaPredicted RBP10.21□□□□□ -0.77
ACTN1-208ENST00000553370 KCNT1Q5JUK3 1230 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 NAPEPLDQ6IQ20 393 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 TMPRSS12Q86WS5 348 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 PASD1Q8IV76 773 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 APCDD1Q8J025 514 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 CCAR2Q8N163 923 aaKnown RBP10.21□□□□□ -0.77
ACTN1-208ENST00000553370 EHBP1Q8NDI1 1231 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 PIP4K2CQ8TBX8 421 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 MRGPRX3Q96LB0 322 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 FAM81BQ96LP2 452 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 TIGD1Q96MW7 591 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 MUC3BQ9H195 1237 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 PDCL3Q9H2J4 239 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 THAP9Q9H5L6 903 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.21□□□□□ -0.77
ACTN1-208ENST00000553370 ADAMTS1Q9UHI8 967 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 XPO7Q9UIA9 1087 aaKnown RBP10.21□□□□□ -0.77
ACTN1-208ENST00000553370 SLCO3A1Q9UIG8 710 aa10.21□□□□□ -0.77
ACTN1-208ENST00000553370 INTS6Q9UL03 887 aaKnown RBP10.21□□□□□ -0.77
ACTN1-208ENST00000553370 NOVA2Q9UNW9 492 aaKnown RBP10.21□□□□□ -0.77
ACTN1-208ENST00000553370 ITIH6Q6UXX5 1313 aa10.21□□□□□ -0.78
ACTN1-208ENST00000553370 KALRNO60229 2985 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-208ENST00000553370 KCNU1A8MYU2 1149 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 E9PAM4 449 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 TLR4O00206 839 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 CBX4O00257 560 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 RRP8O43159 456 aaKnown RBP10.2□□□□□ -0.78
ACTN1-208ENST00000553370 HSF2BPO75031 334 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 RTN2O75298 545 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 GRAP2O75791 330 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 EPHA8P29322 1005 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-208ENST00000553370 NUDT1P36639 197 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 GPD2P43304 727 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 RP1P56715 2156 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 PPP2CBP62714 309 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 PPP2CAP67775 309 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 DAB2P98082 770 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 CENPCQ03188 943 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 PTK2Q05397 1052 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 ZNF177Q13360 481 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-208ENST00000553370 PDCLQ13371 301 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 STAT4Q14765 748 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 ARID5BQ14865 1188 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 SMAD1Q15797 465 aaKnown RBP10.2□□□□□ -0.78
ACTN1-208ENST00000553370 TPD52L1Q16890 204 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-208ENST00000553370 KIF26BQ2KJY2 2108 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 HES3Q5TGS1 186 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 TMEM164Q5U3C3 297 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 SYPL2Q5VXT5 272 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 OR6B2Q6IFH4 312 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 DBX2Q6ZNG2 339 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 ENOSF1Q7L5Y1 443 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 AADATQ8N5Z0 425 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 ARMC2Q8NEN0 867 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 BAP1Q92560 729 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 MYEOVQ96EZ4 313 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 MYO19Q96H55 970 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 SLC39A13Q96H72 371 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 ZSWIM1Q9BR11 485 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 CRACR2AQ9BSW2 395 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 SRRTQ9BXP5 876 aaKnown RBP10.2□□□□□ -0.78
ACTN1-208ENST00000553370 DKK4Q9UBT3 224 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 TSR3Q9UJK0 312 aaKnown RBP10.2□□□□□ -0.78
ACTN1-208ENST00000553370 PCDHGA1Q9Y5H4 931 aa10.2□□□□□ -0.78
ACTN1-208ENST00000553370 CHD5Q8TDI0 1954 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 KPNA3O00505 521 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-208ENST00000553370 SLC7A4O43246 635 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 PAPSS1O43252 624 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-208ENST00000553370 SDC3O75056 442 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 WNT1P04628 370 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 FYNP06241 537 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 RHOCP08134 193 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 C1SP09871 688 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 VAV1P15498 845 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 RECQLP46063 649 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-208ENST00000553370 NXPH1P58417 271 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 KRT83P78385 493 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 LSM11P83369 360 aaKnown RBP eCLIP10.19□□□□□ -0.78
ACTN1-208ENST00000553370 CCDC15Q0P6D6 951 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 MTA1Q13330 715 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 KCNJ12Q14500 433 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 MEA1Q16626 185 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 EFHC1Q5JVL4 640 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 TTI2Q6NXR4 508 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 GBP6Q6ZN66 633 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 Q6ZVU0 165 aa10.19□□□□□ -0.78
ACTN1-208ENST00000553370 BEND5Q7L4P6 421 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms