RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 DENND1CQ8IV53 801 aa11.73□□□□□ -0.53
TMEM116-218ENST00000552839 CHPFQ8IZ52 775 aa11.73□□□□□ -0.53
TMEM116-218ENST00000552839 SYCE1Q8N0S2 351 aa11.73□□□□□ -0.53
TMEM116-218ENST00000552839 TMEM131Q92545 1883 aa11.73□□□□□ -0.53
TMEM116-218ENST00000552839 BTBD6Q96KE9 485 aa11.73□□□□□ -0.53
TMEM116-218ENST00000552839 MRGPRX1Q96LB2 322 aa11.73□□□□□ -0.53
TMEM116-218ENST00000552839 NPY6RQ99463 290 aa11.73□□□□□ -0.53
TMEM116-218ENST00000552839 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
TMEM116-218ENST00000552839 KCNF1Q9H3M0 494 aa11.73□□□□□ -0.53
TMEM116-218ENST00000552839 SUSD2Q9UGT4 822 aa11.73□□□□□ -0.53
TMEM116-218ENST00000552839 PCOLCE2Q9UKZ9 415 aa11.73□□□□□ -0.53
TMEM116-218ENST00000552839 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
TMEM116-218ENST00000552839 ANKRD11Q6UB99 2663 aaPredicted RBP11.73□□□□□ -0.53
TMEM116-218ENST00000552839 GOLGA4Q13439 2230 aaKnown RBP11.72□□□□□ -0.53
TMEM116-218ENST00000552839 ASXL3Q9C0F0 2248 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 TCRBV5S1A1TA0A578 114 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 PRRT4C9JH25 899 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 F5H5T6 163 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 ZBTB24O43167 697 aaPredicted RBP11.72□□□□□ -0.53
TMEM116-218ENST00000552839 STC2O76061 302 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 PROSCO94903 275 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 GNSP15586 552 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 PITX1P78337 314 aaPredicted RBP11.72□□□□□ -0.53
TMEM116-218ENST00000552839 KRT81Q14533 505 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 SYCP2LQ5T4T6 812 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 GRAMD4Q6IC98 578 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 SDE2Q6IQ49 451 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 LRRC31Q6UY01 552 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 SLFN11Q7Z7L1 901 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 FOXJ1Q92949 421 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 BTN2A3PQ96KV6 586 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 GABRG3Q99928 467 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 TKTL2Q9H0I9 626 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 SIK2Q9H0K1 926 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 ZWILCHQ9H900 591 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 IL21RQ9HBE5 538 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 SCUBE2Q9NQ36 999 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 PIGVQ9NUD9 493 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 DNAJC17Q9NVM6 304 aaKnown RBP11.72□□□□□ -0.53
TMEM116-218ENST00000552839 KIAA1522Q9P206 1035 aaPredicted RBP11.72□□□□□ -0.53
TMEM116-218ENST00000552839 PCSK1NQ9UHG2 260 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 TFR2Q9UP52 801 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 REXO2Q9Y3B8 237 aaKnown RBP11.72□□□□□ -0.53
TMEM116-218ENST00000552839 RAD54BQ9Y620 910 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 APC2O95996 2303 aa11.72□□□□□ -0.53
TMEM116-218ENST00000552839 CELSR3Q9NYQ7 3312 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 BTNL10A8MVZ5 291 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 WASH3PC4AMC7 463 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 PJA2O43164 708 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 ACSL4O60488 711 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 MOCS3O95396 460 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 LATS1O95835 1130 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 MAN1A1P33908 653 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 CHKAP35790 457 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 SLC1A1P43005 524 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 WDR45BQ5MNZ6 344 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 RABGAP1LQ5R372 815 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 ACBD5Q5T8D3 534 aaPredicted RBP11.71□□□□□ -0.53
TMEM116-218ENST00000552839 TRNP1Q6NT89 227 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 C11orf63Q6NUN7 778 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 KIAA1324Q6UXG2 1013 aaKnown RBP11.71□□□□□ -0.53
TMEM116-218ENST00000552839 TMPRSS7Q7RTY8 843 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 MARCH9Q86YJ5 346 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 SETD7Q8WTS6 366 aaKnown RBP11.71□□□□□ -0.53
TMEM116-218ENST00000552839 DNASE2BQ8WZ79 361 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 HSPH1Q92598 858 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 PGAP3Q96FM1 320 aaPredicted RBP11.71□□□□□ -0.53
TMEM116-218ENST00000552839 FCRL2Q96LA5 508 aaPredicted RBP11.71□□□□□ -0.53
TMEM116-218ENST00000552839 EPAS1Q99814 870 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 TRIM7Q9C029 511 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 ZDHHC5Q9C0B5 715 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 TOR4AQ9NXH8 423 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 TRMT1Q9NXH9 659 aaKnown RBP11.71□□□□□ -0.53
TMEM116-218ENST00000552839 CACNA2D2Q9NY47 1150 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 DKK4Q9UBT3 224 aa11.71□□□□□ -0.53
TMEM116-218ENST00000552839 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.71□□□□□ -0.53
TMEM116-218ENST00000552839 A0A1B0GTW7 788 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 EIF4E1BA6NMX2 242 aaKnown RBP11.7□□□□□ -0.54
TMEM116-218ENST00000552839 KCNU1A8MYU2 1149 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 NEDD8-MDP1E9PL57 170 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 DAPK3O43293 454 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 KIF5CO60282 957 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 CACNG3O60359 315 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 GREM1O60565 184 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 LRCH4O75427 683 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 MTA2O94776 668 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 IGLV3-25P01717 112 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 KRT7P08729 469 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 TYRP14679 529 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 TFE3P19532 575 aaPredicted RBP11.7□□□□□ -0.54
TMEM116-218ENST00000552839 CD6P30203 668 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 MIPP30301 263 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 PCK1P35558 622 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 CXCR3P49682 368 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 AIF1P55008 147 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 OGDHQ02218 1023 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 SMTNL2Q2TAL5 461 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 RAP1GAP2Q684P5 730 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 TPGS1Q6ZTW0 290 aa11.7□□□□□ -0.54
TMEM116-218ENST00000552839 HTR3DQ70Z44 454 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms