RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 TRIM62Q9BVG3 475 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 LRRC3Q9BY71 257 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 TTYH1Q9H313 450 aaPredicted RBP8.37□□□□□ -1.07
BEST3-211ENST00000552295 PLEKHA4Q9H4M7 779 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 TLE6Q9H808 572 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 ZNF334Q9HCZ1 680 aaPredicted RBP8.37□□□□□ -1.07
BEST3-211ENST00000552295 RRAGDQ9NQL2 400 aaPredicted RBP8.37□□□□□ -1.07
BEST3-211ENST00000552295 TLR8Q9NR97 1041 aaKnown RBP8.37□□□□□ -1.07
BEST3-211ENST00000552295 ABCC13Q9NSE7 274 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 CLIC5Q9NZA1 410 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 EHD2Q9NZN4 543 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 CALCOCO1Q9P1Z2 691 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 AMFRQ9UKV5 643 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 STAP1Q9ULZ2 295 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 ASB3Q9Y575 518 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 HCFC2Q9Y5Z7 792 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 DOCK6Q96HP0 2047 aa8.37□□□□□ -1.07
BEST3-211ENST00000552295 CTAGE9A4FU28 777 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 MIF4GDA9UHW6 222 aaKnown RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 CAPN9O14815 690 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 CCL16O15467 120 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 SPOPO43791 374 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 NUAK1O60285 661 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 RFPL2O75678 378 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 RNF8O76064 485 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 ENDOD1O94919 500 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 IGLV3-25P01717 112 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 INHBBP09529 407 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 HNRNPA1P09651 372 aaKnown RBP eCLIP8.36□□□□□ -1.07
BEST3-211ENST00000552295 RARGP13631 454 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 CTNNA2P26232 953 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 CTNNA1P35221 906 aaKnown RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 GTF2F1P35269 517 aaKnown RBP eCLIP8.36□□□□□ -1.07
BEST3-211ENST00000552295 PCK1P35558 622 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 MARCKSL1P49006 195 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 SULT1E1P49888 294 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 HDAC4P56524 1084 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 RBM10P98175 930 aaKnown RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 AMPD2Q01433 879 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 SLC25A11Q02978 314 aaKnown RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 CDO1Q16878 200 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 SNX30Q5VWJ9 437 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 PAPD7Q5XG87 772 aaKnown RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 CC2D1AQ6P1N0 951 aaPredicted RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 MSANTD2Q6P1R3 559 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 CYP4V2Q6ZWL3 525 aaPredicted RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 SND1Q7KZF4 910 aaKnown RBP eCLIP8.36□□□□□ -1.07
BEST3-211ENST00000552295 STRADAQ7RTN6 431 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 TMEM150AQ86TG1 271 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 ITIH5Q86UX2 942 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 TMC8Q8IU68 726 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 PDZD8Q8NEN9 1154 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 VN1R2Q8NFZ6 395 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 DQX1Q8TE96 717 aaKnown RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 FAM172AQ8WUF8 416 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 UBE2Q2Q8WVN8 375 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 ALG3Q92685 438 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 KRT35Q92764 455 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 PGAP3Q96FM1 320 aaPredicted RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 PEBP4Q96S96 227 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 CDCA3Q99618 268 aaPredicted RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 DUSP15Q9H1R2 295 aaPredicted RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 SMOC2Q9H3U7 446 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.36□□□□□ -1.07
BEST3-211ENST00000552295 RRN3Q9NYV6 651 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 UXTQ9UBK9 157 aaPredicted RBP8.36□□□□□ -1.07
BEST3-211ENST00000552295 CHD9Q3L8U1 2897 aa8.36□□□□□ -1.07
BEST3-211ENST00000552295 CCDC66A2RUB6 948 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 ZNF840PA6NDX5 716 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 WASH4PA8MWX3 477 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 M0QYT0 321 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 IRAK2O43187 625 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 PSTPIP1O43586 416 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 GLP2RO95838 553 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 TRUB2O95900 331 aaKnown RBP8.35□□□□□ -1.07
BEST3-211ENST00000552295 POU2F2P09086 479 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 RALAP11233 206 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 SRFP11831 508 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 DESP17661 470 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 IL1R2P27930 398 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 MIPP30301 263 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 SSR1P43307 286 aaKnown RBP8.35□□□□□ -1.07
BEST3-211ENST00000552295 PPP3CCP48454 512 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 PEX5P50542 639 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 ATXN1P54253 815 aaKnown RBP8.35□□□□□ -1.07
BEST3-211ENST00000552295 EPHA5P54756 1037 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 LINC00310P59036 64 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 DEUP1Q05D60 604 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 HYAL1Q12794 435 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 EIF4EBP2Q13542 120 aaPredicted RBP8.35□□□□□ -1.07
BEST3-211ENST00000552295 RPS6KA1Q15418 735 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 TAF12Q16514 161 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 TCEAL5Q5H9L2 206 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 LRRC38Q5VT99 294 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 DCAF12L1Q5VU92 463 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 TXNRD3NBQ6F5E7 133 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 GAREM2Q75VX8 874 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 TAC4Q86UU9 113 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 RHOT1Q8IXI2 618 aa8.35□□□□□ -1.07
BEST3-211ENST00000552295 ELMOD1Q8N336 334 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms