RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 FAM183BPQ6ZVS7 135 aa16.56■□□□□ 0.24
CALCOCO1-220ENST00000552282 PRPF39Q86UA1 669 aaKnown RBP16.56■□□□□ 0.24
CALCOCO1-220ENST00000552282 SPATS2Q86XZ4 545 aaKnown RBP16.56■□□□□ 0.24
CALCOCO1-220ENST00000552282 GATAD2AQ86YP4 633 aa16.56■□□□□ 0.24
CALCOCO1-220ENST00000552282 TMEM145Q8NBT3 493 aa16.56■□□□□ 0.24
CALCOCO1-220ENST00000552282 NXPE2Q96DL1 559 aa16.56■□□□□ 0.24
CALCOCO1-220ENST00000552282 SIX2Q9NPC8 291 aa16.56■□□□□ 0.24
CALCOCO1-220ENST00000552282 KIAA1468Q9P260 1216 aa16.56■□□□□ 0.24
CALCOCO1-220ENST00000552282 IGLV3-10A0A075B6K4 115 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 TBC1D3DA0A087WVF3 549 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 TBC1D3IA0A087WXS9 549 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 TBC1D3EA0A087X179 549 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 TBC1D3KA0A087X1G2 549 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 TBC1D3FA6NER0 549 aaPredicted RBP16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 TBC1D3LB9A6J9 549 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 PRAMEF26H0Y7S4 382 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 ERBB2P04626 1255 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 TBC1D3HP0C7X1 549 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 PON1P27169 355 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 GABRB2P47870 512 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 CXCR3P49682 368 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 IRAK1P51617 712 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 TAS2R38P59533 333 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 SLC6A3Q01959 620 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 PTK2Q05397 1052 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 CYP4F3Q08477 520 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 DLG2Q15700 870 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 SETMARQ53H47 684 aaPredicted RBP16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 ARTNQ5T4W7 220 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 TBC1D3GQ6DHY5 549 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 TBC1D3CQ6IPX1 549 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 BNIPLQ7Z465 357 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 SETD3Q86TU7 594 aaPredicted RBP16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 TBC1D3Q8IZP1 549 aaPredicted RBP16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 DCAF4L2Q8NA75 395 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 PIP4K2CQ8TBX8 421 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 CRACR2AQ9BSW2 395 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 NRSN2Q9GZP1 204 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 GCN1Q92616 2671 aaKnown RBP16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 DOCK9Q9BZ29 2069 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 CHD5Q8TDI0 1954 aa16.55■□□□□ 0.24
CALCOCO1-220ENST00000552282 PTPRQQ9UMZ3 2332 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 GOLGA8CPA6NN73 597 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 DRGXA6NNA5 263 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 I6L893 689 aaPredicted RBP16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 RTN2O75298 545 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 PAGE1O75459 146 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 SRCP12931 536 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 ACP1P24666 158 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 CNTN1Q12860 1018 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 ZNF177Q13360 481 aaPredicted RBP16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 PROX2Q3B8N5 592 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 PIP5KL1Q5T9C9 394 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 DPY19L2P1Q6NXN4 242 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 C19orf48Q6RUI8 117 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 Q6ZVU0 165 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 FAM71AQ8IYT1 594 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 TMIEQ8NEW7 156 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 C1orf74Q96LT6 269 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 PSMB7Q99436 277 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 C2orf49Q9BVC5 232 aaPredicted RBP16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 PIGVQ9NUD9 493 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 VPS28Q9UK41 221 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 VANGL2Q9ULK5 521 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 PAXBP1Q9Y5B6 917 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 MYLKQ15746 1914 aa16.54■□□□□ 0.24
CALCOCO1-220ENST00000552282 FAM149AA5PLN7 773 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 GADD45BO75293 160 aaPredicted RBP16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 CKMT2P17540 419 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 CLCN1P35523 988 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 KRT83P78385 493 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 ARHGAP44Q17R89 818 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 PRAMEF14Q5SWL7 426 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 C6orf118Q5T5N4 469 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 ARCQ7LC44 396 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 MARCH9Q86YJ5 346 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 OR2A12Q8NGT7 310 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 SNIP1Q8TAD8 396 aaKnown RBP16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 FAM174AQ8TBP5 190 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 IFT43Q96FT9 208 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 CCDC114Q96M63 670 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 GPR27Q9NS67 375 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 ZNF212Q9UDV6 495 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 AJAP1Q9UKB5 411 aaPredicted RBP16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 STAP1Q9ULZ2 295 aa16.53■□□□□ 0.24
CALCOCO1-220ENST00000552282 M0QYT0 321 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 CBX4O00257 560 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 F9P00740 461 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 CTSLP07711 333 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 BPIFB4P59827 614 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 APBA1Q02410 837 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 CCDC15Q0P6D6 951 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 BNIP3Q12983 259 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 DNAJC3Q13217 504 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 OR6B2Q6IFH4 312 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 ZNF783Q6ZMS7 281 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 C14orf80Q86SX3 495 aa16.52■□□□□ 0.24
CALCOCO1-220ENST00000552282 ZSCAN30Q86W11 494 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms