RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 DNAJB5O75953 348 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 INMTO95050 263 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 KIF20AO95235 890 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 PLEKHA8P1O95397 391 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 PLATP00750 562 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 CYP3A4P08684 503 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 FAM86B2P0C5J1 330 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 PIM1P11309 404 aaPredicted RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 HARSP12081 509 aaKnown RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MYL4P12829 197 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 SCG2P13521 617 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 IDEP14735 1019 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 TYRP1P17643 537 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 SLC6A2P23975 617 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 EEF1GP26641 437 aaKnown RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 IL1R2P27930 398 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 HOXC13P31276 330 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 CIITAP33076 1130 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 CTNNB1P35222 781 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 TCF7P36402 384 aaPredicted RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 PBX3P40426 434 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 NRIP1P48552 1158 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 HSPA7P48741 367 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 CHN2P52757 468 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 WNT3P56703 355 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 EVCP57679 992 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MRPS6P82932 125 aaKnown RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 UBE3AQ05086 875 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 DSC1Q08554 894 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 ZNF844Q08AG5 666 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 PMS2P11Q13670 270 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 BLMHQ13867 455 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 RAPGEF1Q13905 1077 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 SLC29A2Q14542 456 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 IQCB1Q15051 598 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 NECTIN1Q15223 517 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 NAB2Q15742 525 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MPEG1Q2M385 716 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 CCDC38Q502W7 563 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 NOMO2Q5JPE7 1267 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 UBXN11Q5T124 520 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 ARHGEF16Q5VV41 709 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 FAM160B1Q5W0V3 765 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 TCTN3Q6NUS6 607 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 FBXO38Q6PIJ6 1188 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 FOXR2Q6PJQ5 311 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MTHFD1LQ6UB35 978 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 LAYNQ6UX15 382 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MFSD6Q6ZSS7 791 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 UNC13DQ70J99 1090 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 CHST3Q7LGC8 479 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MRPL10Q7Z7H8 261 aaKnown RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 CIR1Q86X95 450 aaPredicted RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MICU3Q86XE3 530 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 ZNF354CQ86Y25 554 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 CCDC60Q8IWA6 550 aaPredicted RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 SMAP1Q8IYB5 467 aaPredicted RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 CCDC105Q8IYK2 499 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 FANCBQ8NB91 859 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 COLGALT1Q8NBJ5 622 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 PDPRQ8NCN5 879 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 ZBTB44Q8NCP5 570 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MYRIPQ8NFW9 859 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 OR10H5Q8NGA6 315 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 OR52N2Q8NGI0 321 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 SEPT1Q8WYJ6 367 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MRPS27Q92552 414 aaKnown RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 ESR2Q92731 530 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 SPSB4Q96A44 273 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 LRRC46Q96FV0 321 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 TMEM41AQ96HV5 264 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MBOAT7Q96N66 472 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 KLHL32Q96NJ5 620 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 PPP1R9BQ96SB3 815 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 DCLRE1CQ96SD1 692 aaKnown RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 YME1L1Q96TA2 773 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 CDCA3Q99618 268 aaPredicted RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 RPP25Q9BUL9 199 aaKnown RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 SPATA5L1Q9BVQ7 753 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 AGXT2Q9BYV1 514 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 UPF3BQ9BZI7 483 aaKnown RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 NACAP1Q9BZK3 213 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MS4A7Q9GZW8 240 aaPredicted RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 ZBP1Q9H171 429 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 TM7SF3Q9NS93 570 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MARCH5Q9NX47 278 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 PPP4R1LQ9P1A2 415 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 EPS15L1Q9UBC2 864 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MAN2B2Q9Y2E5 1009 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 NEU2Q9Y3R4 380 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 SLC30A1Q9Y6M5 507 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 DUSP10Q9Y6W6 482 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MORC2Q9Y6X9 1032 aaPredicted RBP2.62□□□□□ -1.99
CPSF6-207ENST00000551516 MAST4O15021 2626 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 NCANO14594 1321 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 NFASCO94856 1347 aa2.62□□□□□ -1.99
CPSF6-207ENST00000551516 IGSF10Q6WRI0 2623 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 FAM208BQ5VWN6 2430 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 COL4A3Q01955 1670 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 GOLGA6L3A6NEY3 463 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms