RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CAPN11Q9UMQ6 739 aa19.47■□□□□ 0.71
DDX54-208ENST00000551344 DDX3XO00571 662 aaKnown RBP eCLIP19.46■□□□□ 0.712e-25■■□□□ 12.7
DDX54-208ENST00000551344 MID1O15344 667 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 CCP110O43303 1012 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 ADH1BP00325 375 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 TPM3P06753 285 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 SYPP08247 313 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 SKILP12757 684 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 RHOQP17081 205 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 ENGP17813 658 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 CLCN6P51797 869 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 ZBED6P86452 979 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 SCYL2Q6P3W7 929 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 DSG4Q86SJ6 1040 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 OR8D1Q8WZ84 308 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 OMDQ99983 421 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 C6orf106Q9H6K1 298 aaPredicted RBP19.46■□□□□ 0.71
DDX54-208ENST00000551344 ADAMTS1Q9UHI8 967 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 VPS51Q9UID3 782 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 FZD4Q9ULV1 537 aa19.46■□□□□ 0.71
DDX54-208ENST00000551344 CXorf51AA0A1B0GTR3 108 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 A0A1B0GTW7 788 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 FAM72CH0Y354 149 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 ARHGAP33O14559 1287 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 MCF2LO15068 1137 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 ALOX15BO15296 676 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 SNAP91O60641 907 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 LRIG2O94898 1065 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 MT-CO1P00395 513 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 IL1BP01584 269 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 SRCP12931 536 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 VAV1P15498 845 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 GOT1P17174 413 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 L1CAMP32004 1257 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 ETFBP38117 255 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 MAPKAPK2P49137 400 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 ATXN3P54252 364 aaPredicted RBP19.45■□□□□ 0.7
DDX54-208ENST00000551344 GNA12Q03113 381 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 FAM72AQ5TYM5 149 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 FAM46CQ5VWP2 391 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 FAM72DQ6L9T8 149 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 RETSATQ6NUM9 610 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 RWDD4Q6NW29 188 aaKnown RBP19.45■□□□□ 0.7
DDX54-208ENST00000551344 FAM72BQ86X60 149 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 ATP11CQ8NB49 1132 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 TBC1D31Q96DN5 1066 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 SPON2Q9BUD6 331 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 ISCUQ9H1K1 167 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 NEUROG2Q9H2A3 272 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 TMEM248Q9NWD8 314 aa19.45■□□□□ 0.7
DDX54-208ENST00000551344 LUC7L2Q9Y383 392 aaKnown RBP19.45■□□□□ 0.7
DDX54-208ENST00000551344 FARP1Q9Y4F1 1045 aaPredicted RBP19.45■□□□□ 0.7
DDX54-208ENST00000551344 DOCK4Q8N1I0 1966 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 A0A1W2PP55 124 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 RNASEH2AO75792 299 aaKnown RBP19.44■□□□□ 0.7
DDX54-208ENST00000551344 MYBL1P10243 752 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 NUMA1Q14980 2115 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 EFHC2Q5JST6 749 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 HGSNATQ68CP4 663 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 TMC6Q7Z403 805 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 VPS36Q86VN1 386 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 NLRP14Q86W24 1093 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 HDDC3Q8N4P3 179 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 OR7D4Q8NG98 312 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 C1orf216Q8TAB5 229 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 FNIP1Q8TF40 1166 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 CPLX3Q8WVH0 158 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 TRIM11Q96F44 468 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 MAGEB5Q9BZ81 275 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 MIR1-1HGQ9H1L0 117 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 EIF2B4Q9UI10 523 aaKnown RBP19.44■□□□□ 0.7
DDX54-208ENST00000551344 PPM1HQ9ULR3 514 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 FZD10Q9ULW2 581 aa19.44■□□□□ 0.7
DDX54-208ENST00000551344 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.44■□□□□ 0.7
DDX54-208ENST00000551344 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.44■□□□□ 0.76e-6■□□□□ 9.8
DDX54-208ENST00000551344 CNOT1A5YKK6 2376 aaKnown RBP19.44■□□□□ 0.7
DDX54-208ENST00000551344 TMEM191CA6NGB0 347 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 LRRC72A6NJI9 287 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 CBX4O00257 560 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 BCAT2O15382 392 aaPredicted RBP19.43■□□□□ 0.7
DDX54-208ENST00000551344 ZMPSTE24O75844 475 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 SERPING1P05155 500 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 PSMD8P48556 350 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 GALCP54803 685 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 OGDHQ02218 1023 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 TDRD12Q587J7 1177 aaKnown RBP19.43■□□□□ 0.7
DDX54-208ENST00000551344 Q6ZVU0 165 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 DRC7Q8IY82 874 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 AADATQ8N5Z0 425 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 BIRC7Q96CA5 298 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 CCDC114Q96M63 670 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 ACE2Q9BYF1 805 aaPredicted RBP19.43■□□□□ 0.7
DDX54-208ENST00000551344 ZDHHC5Q9C0B5 715 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 MAGEH1Q9H213 219 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 TSPY26PQ9H489 355 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 ATP13A1Q9HD20 1204 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 MRPL47Q9HD33 250 aaKnown RBP19.43■□□□□ 0.7
DDX54-208ENST00000551344 OSGEPQ9NPF4 335 aa19.43■□□□□ 0.7
DDX54-208ENST00000551344 CNOT8Q9UFF9 292 aaKnown RBP19.43■□□□□ 0.7
DDX54-208ENST00000551344 SERGEFQ9UGK8 458 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms