RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 RALAP11233 206 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 CCL4P13236 92 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 ITGB7P26010 798 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 NUDT1P36639 197 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 NDST1P52848 882 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 IRX6P78412 446 aaPredicted RBP13.89□□□□□ -0.19
SNRPF-203ENST00000551316 ELAVL3Q14576 367 aaKnown RBP13.89□□□□□ -0.19
SNRPF-203ENST00000551316 TCEA2Q15560 299 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 APCDD1Q8J025 514 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 NAT6Q93015 286 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 MARVELD3Q96A59 401 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 IFT43Q96FT9 208 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 CGRRF1Q99675 332 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 LRRC61Q9BV99 259 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 STRADBQ9C0K7 418 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 CLPBQ9H078 707 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 SFMBT1Q9UHJ3 866 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 KCND3Q9UK17 655 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 PADI4Q9UM07 663 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 CSNK1G3Q9Y6M4 447 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 SPTY2D1-AS1A0A0U1RR47 76 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 ARHGAP10A1A4S6 786 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 SLC7A4O43246 635 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 GCNT3O95395 438 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 STAU1O95793 577 aaKnown RBP13.88□□□□□ -0.19
SNRPF-203ENST00000551316 HOXB4P17483 251 aaPredicted RBP13.88□□□□□ -0.19
SNRPF-203ENST00000551316 HNRNPA2B1P22626 353 aaKnown RBP13.88□□□□□ -0.19
SNRPF-203ENST00000551316 ABCD1P33897 745 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 CDC20Q12834 499 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 DEFB109BQ30KR1 87 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 PIK3R6Q5UE93 754 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 NADSYN1Q6IA69 706 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 NYAP1Q6ZVC0 841 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 PARGQ86W56 976 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 MFN1Q8IWA4 741 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 MMP21Q8N119 569 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 WDR48Q8TAF3 677 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 CPT1CQ8TCG5 803 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 PLEKHO2Q8TD55 490 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 FRS2Q8WU20 508 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 MOCOSQ96EN8 888 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 TNIP3Q96KP6 325 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 IL12RB2Q99665 862 aa13.88□□□□□ -0.19
SNRPF-203ENST00000551316 MRPL44Q9H9J2 332 aaKnown RBP13.88□□□□□ -0.19
SNRPF-203ENST00000551316 A6NNZ2 444 aa13.87□□□□□ -0.19
SNRPF-203ENST00000551316 ASLP04424 464 aa13.87□□□□□ -0.19
SNRPF-203ENST00000551316 JUNDP17535 347 aa13.87□□□□□ -0.19
SNRPF-203ENST00000551316 CASP4P49662 377 aa13.87□□□□□ -0.19
SNRPF-203ENST00000551316 ADKP55263 362 aaKnown RBP13.87□□□□□ -0.19
SNRPF-203ENST00000551316 RPS24P62847 133 aaKnown RBP13.87□□□□□ -0.19
SNRPF-203ENST00000551316 ZFP36L1Q07352 338 aaKnown RBP13.87□□□□□ -0.19
SNRPF-203ENST00000551316 ARHGAP44Q17R89 818 aa13.87□□□□□ -0.19
SNRPF-203ENST00000551316 ADGRF1Q5T601 910 aa13.87□□□□□ -0.19
SNRPF-203ENST00000551316 SFTPA2Q8IWL1 248 aa13.87□□□□□ -0.19
SNRPF-203ENST00000551316 KCTD17Q8N5Z5 321 aa13.87□□□□□ -0.19
SNRPF-203ENST00000551316 FBXO18Q8NFZ0 1043 aa13.87□□□□□ -0.19
SNRPF-203ENST00000551316 NCKIPSDQ9NZQ3 722 aa13.87□□□□□ -0.19
SNRPF-203ENST00000551316 SIRPGQ9P1W8 387 aa13.87□□□□□ -0.19
SNRPF-203ENST00000551316 TCP11X1B4DZS4 312 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 STMND1H3BQB6 276 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 TPP1O14773 563 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 CNTN5O94779 1100 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 CTSLP07711 333 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 AKT2P31751 481 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 HOXD13P35453 343 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 UGT1A3P35503 534 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 PSEN1P49768 467 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 TMEM259Q4ZIN3 620 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 KYAT3Q6YP21 454 aaKnown RBP13.86□□□□□ -0.19
SNRPF-203ENST00000551316 TADA2BQ86TJ2 420 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 HORMAD1Q86X24 394 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 SLITRK4Q8IW52 837 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 CRYBG2Q8N1P7 616 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 TEX19Q8NA77 164 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 KDM1BQ8NB78 822 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 FIBINQ8TAL6 211 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 LARP4BQ92615 738 aaKnown RBP13.86□□□□□ -0.19
SNRPF-203ENST00000551316 CCDC127Q96BQ5 260 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 DNAJC19Q96DA6 116 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 SEMA6CQ9H3T2 930 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 PPM1HQ9ULR3 514 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 EXOC7Q9UPT5 735 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 PCDHB13Q9Y5F0 798 aa13.86□□□□□ -0.19
SNRPF-203ENST00000551316 ZNF233A6NK53 670 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 EFCAB7A8K855 629 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 ZNF891A8MT65 544 aaPredicted RBP13.85□□□□□ -0.19
SNRPF-203ENST00000551316 VNN1O95497 513 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 SRPRAP08240 638 aaKnown RBP13.85□□□□□ -0.19
SNRPF-203ENST00000551316 TNNI1P19237 187 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 YWHAGP61981 247 aaKnown RBP eCLIP13.85□□□□□ -0.19
SNRPF-203ENST00000551316 PDE1CQ14123 709 aaPredicted RBP13.85□□□□□ -0.19
SNRPF-203ENST00000551316 BMT2Q1RMZ1 405 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 ZNF699Q32M78 642 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 PRRT3Q5FWE3 981 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 SYCP3Q8IZU3 236 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 CARNMT1Q8N4J0 409 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 IL22RA1Q8N6P7 574 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 EFCAB3Q8N7B9 438 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 SPAG5Q96R06 1193 aa13.85□□□□□ -0.19
SNRPF-203ENST00000551316 LRRN3Q9H3W5 708 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms