RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 DENND1BQ6P3S1 775 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 ACSM6Q6P461 480 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 ATF7IPQ6VMQ6 1270 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 NEK10Q6ZWH5 1172 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 DGLUCYQ7Z3D6 616 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 CHST13Q8NET6 341 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 SSH3Q8TE77 659 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 NPIPB3Q92617 1050 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 CUL5Q93034 780 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 ALG8Q9BVK2 526 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 TAOK3Q9H2K8 898 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 STN1Q9H668 368 aaKnown RBP5.8□□□□□ -1.48
CPSF6-206ENST00000550987 USP29Q9HBJ7 922 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 RXFP3Q9NSD7 469 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 KLC4Q9NSK0 619 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 PARPBPQ9NWS1 579 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 EHD3Q9NZN3 535 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 CAMK2AQ9UQM7 478 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 ZNF609O15014 1411 aa5.8□□□□□ -1.48
CPSF6-206ENST00000550987 GXYLT2A0PJZ3 443 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 M0QZQ0 153 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 TNPO2O14787 897 aaKnown RBP5.79□□□□□ -1.48
CPSF6-206ENST00000550987 MUSKO15146 869 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 YY2O15391 372 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 SPRY2O43597 315 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 TMPRSS11DO60235 418 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 ZNF500O60304 480 aaPredicted RBP5.79□□□□□ -1.48
CPSF6-206ENST00000550987 USO1O60763 962 aaKnown RBP5.79□□□□□ -1.48
CPSF6-206ENST00000550987 TULP3O75386 442 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 NXPH3O95157 252 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 IL6RP08887 468 aaPredicted RBP5.79□□□□□ -1.48
CPSF6-206ENST00000550987 CSF1P09603 554 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 TMIGD3P0DMS9 266 aaPredicted RBP5.79□□□□□ -1.48
CPSF6-206ENST00000550987 ACRV1P26436 265 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 GGT5P36269 586 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 FAM3BP58499 235 aaPredicted RBP5.79□□□□□ -1.48
CPSF6-206ENST00000550987 E2F1Q01094 437 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 SETQ01105 290 aaPredicted RBP5.79□□□□□ -1.48
CPSF6-206ENST00000550987 CCDC15Q0P6D6 951 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 BMPR2Q13873 1038 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 TOB2Q14106 344 aaPredicted RBP5.79□□□□□ -1.48
CPSF6-206ENST00000550987 ICAM4Q14773 271 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 CCNG2Q16589 344 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 ZNF585AQ6P3V2 769 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 VWA1Q6PCB0 445 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 C16orf89Q6UX73 402 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 CCDC129Q6ZRS4 1044 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 B4GALNT4Q76KP1 1039 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 ADAMTS15Q8TE58 950 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 SNRNP27Q8WVK2 155 aaKnown RBP5.79□□□□□ -1.48
CPSF6-206ENST00000550987 LOXL4Q96JB6 756 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 PRR25Q96S07 402 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 CD180Q99467 661 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 CLPBQ9H078 707 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 TTYH1Q9H313 450 aaPredicted RBP5.79□□□□□ -1.48
CPSF6-206ENST00000550987 SNX15Q9NRS6 342 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 CLIC5Q9NZA1 410 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 DKK3Q9UBP4 350 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 AMFRQ9UKV5 643 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 RCE1Q9Y256 329 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 COL4A6Q14031 1691 aa5.79□□□□□ -1.48
CPSF6-206ENST00000550987 ABCA12Q86UK0 2595 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 WDR17Q8IZU2 1322 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 PI4KAP2A4QPH2 592 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 MARCH11A6NNE9 402 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 PI4K2BG5E9Z4 385 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 PEX1O43933 1283 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 TMEM63AO94886 807 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 SPDEFO95238 335 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 SLC3A2P08195 630 aaKnown RBP5.78□□□□□ -1.48
CPSF6-206ENST00000550987 CYP3A4P08684 503 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 NR2F6P10588 404 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 ITGAMP11215 1152 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 ZFXP17010 805 aaPredicted RBP5.78□□□□□ -1.48
CPSF6-206ENST00000550987 PTPRZ1P23471 2315 aaPredicted RBP5.78□□□□□ -1.48
CPSF6-206ENST00000550987 MCM5P33992 734 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 DRG2P55039 364 aaKnown RBP5.78□□□□□ -1.48
CPSF6-206ENST00000550987 JAG1P78504 1218 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 TLE3Q04726 772 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 DEUP1Q05D60 604 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 MPP3Q13368 585 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 DNASE1L3Q13609 305 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 PLAC9Q5JTB6 97 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 PTCHD4Q6ZW05 846 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 PARS2Q7L3T8 475 aaKnown RBP5.78□□□□□ -1.48
CPSF6-206ENST00000550987 ADGRG6Q86SQ4 1221 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.78□□□□□ -1.48
CPSF6-206ENST00000550987 PNPLA1Q8N8W4 532 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 SRFBP1Q8NEF9 429 aaKnown RBP5.78□□□□□ -1.48
CPSF6-206ENST00000550987 OR52L2PQ8NGH6 319 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 SPATA18Q8TC71 538 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 SLC2A12Q8TD20 617 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 ADAMTS18Q8TE60 1221 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 SLC25A43Q8WUT9 341 aaPredicted RBP5.78□□□□□ -1.48
CPSF6-206ENST00000550987 KCNJ9Q92806 393 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 ERP27Q96DN0 273 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 KIF1BPQ96EK5 621 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 WDYHV1Q96HA8 205 aa5.78□□□□□ -1.48
CPSF6-206ENST00000550987 PRR11Q96HE9 360 aaPredicted RBP5.78□□□□□ -1.48
CPSF6-206ENST00000550987 SMG1Q96Q15 3661 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms