RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SLC12A8A0AV02 714 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 NPEPPSL1A6NEC2 478 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 NT5C1B-RDH14C9J2C7 533 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 F8VZ95 297 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 I3L4J1 428 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 PPP1R12AO14974 1030 aaPredicted RBP6.07□□□□□ -1.44
SCAF11-213ENST00000550629 SUV39H1O43463 412 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 TBC1D4O60343 1298 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 CLSTN1O94985 981 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 ADCY5O95622 1261 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 MPIG6BO95866 241 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 FSHBP01225 129 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 PAEPP09466 180 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 WEE2P0C1S8 567 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 CTSAP10619 480 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 TKTP29401 623 aaKnown RBP6.07□□□□□ -1.44
SCAF11-213ENST00000550629 HNRNPH3P31942 346 aaKnown RBP6.07□□□□□ -1.44
SCAF11-213ENST00000550629 GNL1P36915 607 aaPredicted RBP6.07□□□□□ -1.44
SCAF11-213ENST00000550629 BRCC3P46736 316 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 NDUFV1P49821 464 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 ZNF132P52740 706 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 IL13RA1P78552 427 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 ZBED6P86452 979 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 TSPY1Q01534 308 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 LRMPQ12912 555 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 GPM6BQ13491 265 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 SMC1AQ14683 1233 aaKnown RBP6.07□□□□□ -1.44
SCAF11-213ENST00000550629 PTPN14Q15678 1187 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 MEA1Q16626 185 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 PTPROQ16827 1216 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 WSCD1Q658N2 575 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 SPOPLQ6IQ16 392 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 ZNF280DQ6N043 979 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 RRAGAQ7L523 313 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 CACNA2D4Q7Z3S7 1137 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 ARHGEF19Q8IW93 802 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 REXO1L1PQ8IX06 675 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 DRC7Q8IY82 874 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 VPS52Q8N1B4 723 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 LNX1Q8TBB1 728 aaPredicted RBP6.07□□□□□ -1.44
SCAF11-213ENST00000550629 SPPL3Q8TCT6 385 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 HASPINQ8TF76 798 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 C2orf15Q8WU43 125 aaKnown RBP6.07□□□□□ -1.44
SCAF11-213ENST00000550629 RIN2Q8WYP3 895 aaPredicted RBP6.07□□□□□ -1.44
SCAF11-213ENST00000550629 DLG3Q92796 817 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 SPAG5Q96R06 1193 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 MRPL45Q9BRJ2 306 aaKnown RBP6.07□□□□□ -1.44
SCAF11-213ENST00000550629 ZBP1Q9H171 429 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 SDCBP2Q9H190 292 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 SMYD3Q9H7B4 428 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 TLR9Q9NR96 1032 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 HSFX1Q9UBD0 423 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 MTRRQ9UBK8 725 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 CDH9Q9ULB4 789 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 CAPN11Q9UMQ6 739 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 LUC7L2Q9Y383 392 aaKnown RBP6.07□□□□□ -1.44
SCAF11-213ENST00000550629 B3GALT1Q9Y5Z6 326 aa6.07□□□□□ -1.44
SCAF11-213ENST00000550629 A8MXQ7 604 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 GOLGA6L6A8MZA4 724 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 C1QTNF3-AMACRE9PGA6 284 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 FOXN3O00409 490 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 EPHB6O15197 1021 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 GRM6O15303 877 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 GPR42O15529 346 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 LPXNO60711 386 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 DNAJC8O75937 253 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 CNOT4O95628 575 aaKnown RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 GYPCP04921 128 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 ZNF888P0CJ79 500 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 FERP16591 822 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 CD58P19256 250 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 POU3F3P20264 500 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 ANXA13P27216 316 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 SOX5P35711 763 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 STAT1P42224 750 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 KLK7P49862 253 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 NDST1P52848 882 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 RAD23BP54727 409 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 CDH8P55286 799 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 POLR2FP61218 127 aaKnown RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 APBA1Q02410 837 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 TBX2Q13207 712 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 GPR17Q13304 367 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 TOP3AQ13472 1001 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 RAPGEF1Q13905 1077 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 DRAP1Q14919 205 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 STILQ15468 1287 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 PSMD5Q16401 504 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 NFE2Q16621 373 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 CTXN3Q4LDR2 81 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 TPGS2Q68CL5 300 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 SCARA5Q6ZMJ2 495 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 RTL10Q7L3V2 364 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 TAS1R1Q7RTX1 841 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 CEP57Q86XR8 500 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 ZNF677Q86XU0 584 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 CNGA4Q8IV77 575 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 DCP1BQ8IZD4 617 aaKnown RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 B3GALNT2Q8NCR0 500 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 OR6B3Q8NGW1 331 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms