RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ACP6Q9NPH0 428 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 PPM1HQ9ULR3 514 aa23.71■■□□□ 1.39
SMARCD1-209ENST00000550477 C10orf142B7Z368 130 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 WNT9AO14904 365 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 BNIP3LO60238 219 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 GRAP2O75791 330 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 SLC9A1P19634 815 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 NOS2P35228 1153 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 NUMBP49757 651 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 SLC6A3Q01959 620 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 BNIP3Q12983 259 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 FAM131CQ96AQ9 280 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 DCBLD2Q96PD2 775 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 NRSN2Q9GZP1 204 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 PDCL3Q9H2J4 239 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 ARHGAP20Q9P2F6 1191 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 RWDD2AQ9UIY3 292 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 STAP1Q9ULZ2 295 aa23.7■■□□□ 1.38
SMARCD1-209ENST00000550477 NYNRINQ9P2P1 1898 aaKnown RBP23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 GTPBP10A4D1E9 387 aaKnown RBP23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 M0QYT0 321 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 RRP8O43159 456 aaKnown RBP23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 F9P00740 461 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 ACADVLP49748 655 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 BPIFB4P59827 614 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 CENPCQ03188 943 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 CNTN1Q12860 1018 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 SOWAHCQ53LP3 525 aaPredicted RBP23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 NEK5Q6P3R8 708 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 LRRC31Q6UY01 552 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 PASD1Q8IV76 773 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 SH2D3CQ8N5H7 860 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 C1orf131Q8NDD1 294 aaKnown RBP23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 SIK2Q9H0K1 926 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 TBC1D30Q9Y2I9 924 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 HS3ST4Q9Y661 456 aa23.69■■□□□ 1.38
SMARCD1-209ENST00000550477 FASNP49327 2511 aaKnown RBP23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 BECN2A8MW95 431 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 CBX4O00257 560 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 DAB1O75553 588 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 E2F1Q01094 437 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 TARDBPQ13148 414 aaKnown RBP eCLIP23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 TPD52L1Q16890 204 aaPredicted RBP23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 BRMS1LQ5PSV4 323 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 HES3Q5TGS1 186 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 GJB7Q6PEY0 223 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 FAM183BPQ6ZVS7 135 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 Q6ZVU0 165 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 SLC26A9Q7LBE3 791 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 WDTC1Q8N5D0 677 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 ATP11CQ8NB49 1132 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 SHC3Q92529 594 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 TSC1Q92574 1164 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 ALG14Q96F25 216 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 SARDHQ9UL12 918 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 FREM2Q5SZK8 3169 aa23.68■■□□□ 1.38
SMARCD1-209ENST00000550477 PAGE1O75459 146 aa23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 PRNPP04156 253 aa23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 RHOCP08134 193 aa23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 RECQLP46063 649 aaPredicted RBP23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 MTIF2P46199 727 aaKnown RBP23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 AGBL4Q5VU57 503 aa23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 SFMBT2Q5VUG0 894 aa23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 SETD3Q86TU7 594 aaPredicted RBP23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 SPATS2Q86XZ4 545 aaKnown RBP23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 CACTIN-AS1Q8N1I8 211 aa23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 ZNF397Q8NF99 534 aaPredicted RBP23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 BAP1Q92560 729 aa23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 HS3ST2Q9Y278 367 aa23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 ASXL3Q9C0F0 2248 aa23.67■■□□□ 1.38
SMARCD1-209ENST00000550477 KPNA3O00505 521 aaPredicted RBP23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 CLCN6P51797 869 aa23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 DAB2P98082 770 aa23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 SEMG2Q02383 582 aa23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 POM121L1PQ3SYA9 428 aa23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 C5orf22Q49AR2 442 aa23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 FBXL19Q6PCT2 694 aa23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 OLFML1Q6UWY5 402 aa23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 TMIEQ8NEW7 156 aa23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 PPP1R16AQ96I34 528 aa23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 TKTL2Q9H0I9 626 aa23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 OR51B4Q9Y5P0 310 aa23.66■■□□□ 1.38
SMARCD1-209ENST00000550477 PRKCSHP14314 528 aaPredicted RBP23.65■■□□□ 1.38
SMARCD1-209ENST00000550477 PON1P27169 355 aa23.65■■□□□ 1.38
SMARCD1-209ENST00000550477 AKT2P31751 481 aa23.65■■□□□ 1.38
SMARCD1-209ENST00000550477 CHRNA3P32297 505 aa23.65■■□□□ 1.38
SMARCD1-209ENST00000550477 METAP1P53582 386 aa23.65■■□□□ 1.38
SMARCD1-209ENST00000550477 RNASE9P60153 205 aaKnown RBP23.65■■□□□ 1.38
SMARCD1-209ENST00000550477 TMEM35BQ8NCS4 154 aa23.65■■□□□ 1.38
SMARCD1-209ENST00000550477 FAM174AQ8TBP5 190 aa23.65■■□□□ 1.38
SMARCD1-209ENST00000550477 EVA1BQ9NVM1 165 aa23.65■■□□□ 1.38
SMARCD1-209ENST00000550477 KIAA1468Q9P260 1216 aa23.65■■□□□ 1.38
SMARCD1-209ENST00000550477 CLCA2Q9UQC9 943 aa23.65■■□□□ 1.38
SMARCD1-209ENST00000550477 SLC31A1O15431 190 aa23.64■■□□□ 1.37
SMARCD1-209ENST00000550477 ERBB2P04626 1255 aa23.64■■□□□ 1.37
SMARCD1-209ENST00000550477 THEGLP0DJG4 465 aa23.64■■□□□ 1.37
SMARCD1-209ENST00000550477 SRCP12931 536 aa23.64■■□□□ 1.37
SMARCD1-209ENST00000550477 ACP1P24666 158 aa23.64■■□□□ 1.37
SMARCD1-209ENST00000550477 DEUP1Q05D60 604 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms