RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ARRB1P49407 418 aaPredicted RBP11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 CDR2Q01850 454 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 CENPCQ03188 943 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 CDKAL1Q5VV42 579 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 TAF3Q5VWG9 929 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 RBM43Q6ZSC3 357 aaKnown RBP11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 C14orf80Q86SX3 495 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 NOP9Q86U38 636 aaKnown RBP11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 IQCHQ86VS3 1027 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 CHCHD4Q8N4Q1 142 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 SH2D3CQ8N5H7 860 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 AADATQ8N5Z0 425 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 MFSD2AQ8NA29 543 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 DCAF4L2Q8NA75 395 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 ATP11CQ8NB49 1132 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 TMIEQ8NEW7 156 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 BAHD1Q8TBE0 780 aaPredicted RBP11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 CPA5Q8WXQ8 436 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 SERAC1Q96JX3 654 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 TBCBQ99426 244 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 ELF4Q99607 663 aaPredicted RBP11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 TMEM121BQ9BXQ6 578 aaPredicted RBP11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 VPS16Q9H269 839 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 ERVMER34-1Q9H9K5 563 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 AASDHPPTQ9NRN7 309 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 TAB2Q9NYJ8 693 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 PPARGC1AQ9UBK2 798 aaKnown RBP11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 SERGEFQ9UGK8 458 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 KLK13Q9UKR3 277 aa11.16□□□□□ -0.62
VTI1BP3-201ENST00000550220 CABIN1Q9Y6J0 2220 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 A0A1B0GTQ1 180 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 LRRC10BA6NIK2 292 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 E9PAM4 449 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 TLR4O00206 839 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 PLRG1O43660 514 aaKnown RBP11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 CNTN5O94779 1100 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 GFPT2O94808 682 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 ENDOD1O94919 500 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 TOP3BO95985 862 aaKnown RBP11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 PRNPP04156 253 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 CYP1A1P04798 512 aaPredicted RBP11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 MMEP08473 750 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 MMP8P22894 467 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 SDC4P31431 198 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 NOMO3P69849 1222 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 STAT4Q14765 748 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 KRT31Q15323 416 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 SYCP1Q15431 976 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 SETMARQ53H47 684 aaPredicted RBP11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 OTUD1Q5VV17 481 aaPredicted RBP11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 NAA35Q5VZE5 725 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 NAPEPLDQ6IQ20 393 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 BNIPLQ7Z465 357 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 TRIM69Q86WT6 500 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 ZNF683Q8IZ20 524 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 GALNT15Q8N3T1 639 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 PIP4K2CQ8TBX8 421 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 PPP1R16AQ96I34 528 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 SLC6A18Q96N87 628 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 ZYG11BQ9C0D3 744 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 CEP44Q9C0F1 390 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 GANQ9H2C0 597 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 PREBQ9HCU5 417 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 DYRK4Q9NR20 520 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 FAM207AQ9NSI2 230 aaPredicted RBP11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 FANCLQ9NW38 375 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 ZMIZ1Q9ULJ6 1067 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 CEP192Q8TEP8 1941 aa11.15□□□□□ -0.62
VTI1BP3-201ENST00000550220 PRAMEF26H0Y7S4 382 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 H0Y8X5 98 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 GOLGA8SH3BPF8 625 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 SRGAP2O75044 1071 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 DKK1O94907 266 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 ITGAVP06756 1048 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 C1SP09871 688 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 SRCP12931 536 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 VAV1P15498 845 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 DESP17661 470 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 CDK11BP21127 795 aaKnown RBP11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 CHRNA3P32297 505 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 DRD3P35462 400 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 FLT3P36888 993 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 NSFP46459 744 aaKnown RBP11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 RXRGP48443 463 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 GEMIN4P57678 1058 aaKnown RBP11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 MYL5Q02045 173 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 NRG1Q02297 640 aaPredicted RBP11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 STX1AQ16623 288 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 ALFQ53S48 1182 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 CCNI2Q6ZMN8 369 aaPredicted RBP11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 Q6ZVU0 165 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 STRADAQ7RTN6 431 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 TMPRSS7Q7RTY8 843 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 ZSCAN30Q86W11 494 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 NEK11Q8NG66 645 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 FAM174AQ8TBP5 190 aa11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 ZCCHC14Q8WYQ9 949 aaKnown RBP11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 PCMTD1Q96MG8 357 aaPredicted RBP11.14□□□□□ -0.63
VTI1BP3-201ENST00000550220 CFAP57Q96MR6 1250 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms