RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 FGFR1P11362 822 aa15.26■□□□□ 0.03
CUX1-214ENST00000550008 FOXN2P32314 431 aa15.26■□□□□ 0.03
CUX1-214ENST00000550008 CYLC2Q14093 348 aaPredicted RBP15.26■□□□□ 0.03
CUX1-214ENST00000550008 C10orf107Q8IVU9 208 aa15.26■□□□□ 0.03
CUX1-214ENST00000550008 PCYOX1LQ8NBM8 494 aa15.26■□□□□ 0.03
CUX1-214ENST00000550008 DQX1Q8TE96 717 aaKnown RBP15.26■□□□□ 0.03
CUX1-214ENST00000550008 ZMAT2Q96NC0 199 aaKnown RBP15.26■□□□□ 0.03
CUX1-214ENST00000550008 TRIM15Q9C019 465 aa15.26■□□□□ 0.03
CUX1-214ENST00000550008 XYLT2Q9H1B5 865 aa15.26■□□□□ 0.03
CUX1-214ENST00000550008 ALG9Q9H6U8 611 aa15.26■□□□□ 0.03
CUX1-214ENST00000550008 RABGEF1Q9UJ41 708 aa15.26■□□□□ 0.03
CUX1-214ENST00000550008 GIT1Q9Y2X7 761 aa15.26■□□□□ 0.03
CUX1-214ENST00000550008 ORC6Q9Y5N6 252 aa15.26■□□□□ 0.03
CUX1-214ENST00000550008 A0A1W2PQH9 124 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 VPS26AO75436 327 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 THRAP10827 490 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 RGS4P49798 205 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 NCALDP61601 193 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 MSS51Q4VC12 460 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 RAB6CQ53S08 254 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 LDB1Q86U70 411 aaPredicted RBP15.25■□□□□ 0.03
CUX1-214ENST00000550008 CACUL1Q86Y37 369 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 TEKT4Q8WW24 435 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 CIPCQ9C0C6 399 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 RAB6CQ9H0N0 254 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 SNX15Q9NRS6 342 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 NAV1Q8NEY1 1877 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 MARF1Q9Y4F3 1742 aaKnown RBP15.25■□□□□ 0.03
CUX1-214ENST00000550008 TRPC5OSA6NMA1 111 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 KATNA1O75449 491 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 CCDC166P0CW27 439 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 FMO4P31512 558 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 HDAC4P56524 1084 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 WDR4P57081 412 aaKnown RBP15.25■□□□□ 0.03
CUX1-214ENST00000550008 OLIG2Q13516 323 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 UBAP2Q5T6F2 1119 aaKnown RBP15.25■□□□□ 0.03
CUX1-214ENST00000550008 VSTM1Q6UX27 236 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 DENND1CQ8IV53 801 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 SH3KBP1Q96B97 665 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 VAT1Q99536 393 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 EFCAB1Q9HAE3 211 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 BPIFA1Q9NP55 256 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 PNPOQ9NVS9 261 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 WWOXQ9NZC7 414 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 HEATR9A2RTY3 570 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 IL10P22301 178 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 NFKBIAP25963 317 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 SERPINH1P50454 418 aaKnown RBP15.25■□□□□ 0.03
CUX1-214ENST00000550008 KYAT3Q6YP21 454 aaKnown RBP15.25■□□□□ 0.03
CUX1-214ENST00000550008 YTHDF3Q7Z739 585 aaKnown RBP15.25■□□□□ 0.03
CUX1-214ENST00000550008 ZNF567Q8N184 647 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 CENPKQ9BS16 269 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 WARS2Q9UGM6 360 aaKnown RBP15.25■□□□□ 0.03
CUX1-214ENST00000550008 TIAM2Q8IVF5 1701 aa15.25■□□□□ 0.03
CUX1-214ENST00000550008 BAIAP3O94812 1187 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 SPATA31D3P0C874 917 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 HNRNPLP14866 589 aaKnown RBP eCLIP15.24■□□□□ 0.036e-8■■■■■ 28.9
CUX1-214ENST00000550008 TIGD5Q53EQ6 642 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 SNX30Q5VWJ9 437 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 SPATA31D4Q6ZUB0 917 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 TMPRSS6Q8IU80 811 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 CEP70Q8NHQ1 597 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 CD101Q93033 1021 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 ACE2Q9BYF1 805 aaPredicted RBP15.24■□□□□ 0.03
CUX1-214ENST00000550008 PLK2Q9NYY3 685 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 SOX13Q9UN79 622 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 MFHAS1Q9Y4C4 1052 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 PTCH2Q9Y6C5 1203 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 BTAF1O14981 1849 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 TLR5O60602 858 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 EPHA3P29320 983 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 SLC5A3P53794 718 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 WNT3AP56704 352 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 INHBEP58166 350 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 FKBP1BP68106 108 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 TAF10Q12962 218 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 TAC4Q86UU9 113 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 MPP5Q8N3R9 675 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 SNX31Q8N9S9 440 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 OR52K2Q8NGK3 314 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 PYDC1Q8WXC3 89 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 SERAC1Q96JX3 654 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 POMKQ9H5K3 350 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 DERAQ9Y315 318 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 STYXL1Q9Y6J8 313 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 SIPA1L3O60292 1781 aaPredicted RBP15.24■□□□□ 0.03
CUX1-214ENST00000550008 C9IYK1 514 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 PFDN1O60925 122 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 DUSP11O75319 330 aaKnown RBP15.24■□□□□ 0.03
CUX1-214ENST00000550008 RPL9P32969 192 aaKnown RBP15.24■□□□□ 0.03
CUX1-214ENST00000550008 MSX2P35548 267 aaPredicted RBP15.24■□□□□ 0.03
CUX1-214ENST00000550008 GJA9P57773 515 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 ELAVL2Q12926 359 aaKnown RBP15.24■□□□□ 0.03
CUX1-214ENST00000550008 CIR1Q86X95 450 aaPredicted RBP15.24■□□□□ 0.03
CUX1-214ENST00000550008 CMASQ8NFW8 434 aaPredicted RBP15.24■□□□□ 0.03
CUX1-214ENST00000550008 STRA6Q9BX79 667 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 NMUR2Q9GZQ4 415 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 GLI3P10071 1580 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 CITO14578 2027 aa15.24■□□□□ 0.03
CUX1-214ENST00000550008 CRTAMO95727 393 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms