RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 EDEM3Q9BZQ6 932 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 ZYG11BQ9C0D3 744 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 KLC2Q9H0B6 622 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 MIR1-1HGQ9H1L0 117 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 TNKS2Q9H2K2 1166 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 TSPY26PQ9H489 355 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 NOL6Q9H6R4 1146 aaKnown RBP10.03□□□□□ -0.8
HDAC7-229ENST00000549883 CAPN10Q9HC96 672 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 FBXL12Q9NXK8 326 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 MYO1AQ9UBC5 1043 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 EVLQ9UI08 416 aaPredicted RBP10.03□□□□□ -0.8
HDAC7-229ENST00000549883 EIF2B4Q9UI10 523 aaKnown RBP10.03□□□□□ -0.8
HDAC7-229ENST00000549883 DNAI1Q9UI46 699 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 FZD10Q9ULW2 581 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 PAXBP1Q9Y5B6 917 aa10.03□□□□□ -0.8
HDAC7-229ENST00000549883 CACNA1AO00555 2505 aa10.02□□□□□ -0.8
HDAC7-229ENST00000549883 A0A087X0T9 212 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 A0A1W2PQJ5 194 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 FAM47DPA6NHR8 397 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 MEI4A8MW99 385 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 CBX4O00257 560 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 GIPC1O14908 333 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 RNASEH2AO75792 299 aaKnown RBP10.02□□□□□ -0.81
HDAC7-229ENST00000549883 SEMA4FO95754 770 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 DNTTP04053 509 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 CTSLP07711 333 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 FAM228BP0C875 321 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 TCF4P15884 667 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 OXTRP30559 389 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 CASP14P31944 242 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 DRD3P35462 400 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 LIMK1P53667 647 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 ARF5P84085 180 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 GNA12Q03113 381 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 SULT2A1Q06520 285 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 MTA1Q13330 715 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 E2F5Q15329 346 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 DUOXA1Q1HG43 343 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 DCUN1D2Q6PH85 259 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 LRSAM1Q6UWE0 723 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 CYP4V2Q6ZWL3 525 aaPredicted RBP10.02□□□□□ -0.81
HDAC7-229ENST00000549883 TMC6Q7Z403 805 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 SLFN11Q7Z7L1 901 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 SETD3Q86TU7 594 aaPredicted RBP10.02□□□□□ -0.81
HDAC7-229ENST00000549883 DCAF4L2Q8NA75 395 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 CHST14Q8NCH0 376 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 GANCQ8TET4 914 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 DNASE2BQ8WZ79 361 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 SNX19Q92543 992 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 NTAN1Q96AB6 310 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 BIRC7Q96CA5 298 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 ZNF653Q96CK0 615 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 ORAI3Q9BRQ5 295 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 CNPY3Q9BT09 278 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 OSBPL2Q9H1P3 480 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 EBF2Q9HAK2 575 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 ARHGAP20Q9P2F6 1191 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 PPARGC1AQ9UBK2 798 aaKnown RBP10.02□□□□□ -0.81
HDAC7-229ENST00000549883 CNOT8Q9UFF9 292 aaKnown RBP10.02□□□□□ -0.81
HDAC7-229ENST00000549883 ADAMTS1Q9UHI8 967 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 SLC25A13Q9UJS0 675 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 CAPN11Q9UMQ6 739 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 SLC6A14Q9UN76 642 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 HS3ST2Q9Y278 367 aa10.02□□□□□ -0.81
HDAC7-229ENST00000549883 CABIN1Q9Y6J0 2220 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 ILVBLA1L0T0 632 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 TMEM191CA6NGB0 347 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 WNT9AO14904 365 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 CREB3O43889 395 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 RTN2O75298 545 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 FSBPO95073 299 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 IL1BP01584 269 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 IGHV4-34P06331 123 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 SERPINF2P08697 491 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 GZMAP12544 262 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 KCNA4P22459 653 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 PSMA2P25787 234 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 VASPP50552 380 aaPredicted RBP10.01□□□□□ -0.81
HDAC7-229ENST00000549883 GALCP54803 685 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 OXCT1P55809 520 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 ZBED6P86452 979 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 NRG1Q02297 640 aaPredicted RBP10.01□□□□□ -0.81
HDAC7-229ENST00000549883 ZBTB16Q05516 673 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 SCAPQ12770 1279 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 SEMA3BQ13214 749 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 UAP1L1Q3KQV9 507 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 ARL13BQ3SXY8 428 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 TTC31Q49AM3 519 aaPredicted RBP10.01□□□□□ -0.81
HDAC7-229ENST00000549883 TDRD12Q587J7 1177 aaKnown RBP10.01□□□□□ -0.81
HDAC7-229ENST00000549883 PPM1JQ5JR12 505 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 KCNT1Q5JUK3 1230 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 C6orf118Q5T5N4 469 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 NCEH1Q6PIU2 408 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.01□□□□□ -0.81
HDAC7-229ENST00000549883 CPNE8Q86YQ8 564 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 HDDC3Q8N4P3 179 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 ATP11CQ8NB49 1132 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 CADM4Q8NFZ8 388 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 OR2A12Q8NGT7 310 aa10.01□□□□□ -0.81
HDAC7-229ENST00000549883 VOPP1Q96AW1 172 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms