RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 MARK2Q7KZI7 788 aaKnown RBP19.52■□□□□ 0.72
BRF1-215ENST00000549655 MTBPQ96DY7 904 aa19.52■□□□□ 0.72
BRF1-215ENST00000549655 C12orf65Q9H3J6 166 aaKnown RBP19.52■□□□□ 0.72
BRF1-215ENST00000549655 RC3H2Q9HBD1 1191 aaKnown RBP19.52■□□□□ 0.72
BRF1-215ENST00000549655 DNMT3LQ9UJW3 386 aa19.52■□□□□ 0.72
BRF1-215ENST00000549655 HMX2A2RU54 273 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 TRIM43BA6NCK2 446 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 DRGXA6NNA5 263 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 MT-CYBP00156 380 aaPredicted RBP19.52■□□□□ 0.71
BRF1-215ENST00000549655 HLA-DQB2P05538 268 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 ADRA1DP25100 572 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 ATP5C1P36542 298 aaKnown RBP19.52■□□□□ 0.71
BRF1-215ENST00000549655 NPY2RP49146 381 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 KCNQ1P51787 676 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 NEK3P51956 506 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 BTG3Q14201 252 aaPredicted RBP19.52■□□□□ 0.71
BRF1-215ENST00000549655 ANO4Q32M45 955 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 ACBD5Q5T8D3 534 aaPredicted RBP19.52■□□□□ 0.71
BRF1-215ENST00000549655 NADSYN1Q6IA69 706 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 LINC00523Q86TU6 105 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 CHSY1Q86X52 802 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 ANKLE1Q8NAG6 615 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 PDZD8Q8NEN9 1154 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 TRIM43Q96BQ3 446 aaPredicted RBP19.52■□□□□ 0.71
BRF1-215ENST00000549655 HMCESQ96FZ2 354 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 RPRD1AQ96P16 312 aaPredicted RBP19.52■□□□□ 0.71
BRF1-215ENST00000549655 FCRL3Q96P31 734 aaPredicted RBP19.52■□□□□ 0.71
BRF1-215ENST00000549655 CYP4F11Q9HBI6 524 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 SLC17A6Q9P2U8 582 aa19.52■□□□□ 0.71
BRF1-215ENST00000549655 HBS1LQ9Y450 684 aaKnown RBP19.52■□□□□ 0.71
BRF1-215ENST00000549655 ATXN2Q99700 1313 aaKnown RBP19.51■□□□□ 0.71
BRF1-215ENST00000549655 GOLGA6L7A0A1B0GV03 622 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 ATP9BO43861 1147 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 SNX3O60493 162 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 ANXA9O76027 345 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 NEBLO76041 1014 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 KIAA0754O94854 1291 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 TPH1P17752 444 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 WDR5P61964 334 aaKnown RBP19.51■□□□□ 0.71
BRF1-215ENST00000549655 CDH17Q12864 832 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 MROH9Q5TGP6 573 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 SNX30Q5VWJ9 437 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 TPGS2Q68CL5 300 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 FBXO46Q6PJ61 603 aaPredicted RBP19.51■□□□□ 0.71
BRF1-215ENST00000549655 TMEM135Q86UB9 458 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 ZNF276Q8N554 614 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 ANKS4BQ8N8V4 417 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 OVCA2Q8WZ82 227 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 IL22Q9GZX6 179 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 NACA2Q9H009 215 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 IL1RAPL1Q9NZN1 696 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 HSFX1Q9UBD0 423 aa19.51■□□□□ 0.71
BRF1-215ENST00000549655 ZNF840PA6NDX5 716 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 AP3B1O00203 1094 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 RFPL1O75677 317 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 ERVK-10P10266 1014 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 HMGA1P17096 107 aaKnown RBP19.5■□□□□ 0.71
BRF1-215ENST00000549655 MGAT5Q09328 741 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 MTA1Q13330 715 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 RGS9BPQ6ZS82 235 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 RASSF3Q86WH2 238 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 CIR1Q86X95 450 aaPredicted RBP19.5■□□□□ 0.71
BRF1-215ENST00000549655 ZNF669Q96BR6 464 aaPredicted RBP19.5■□□□□ 0.71
BRF1-215ENST00000549655 CERS2Q96G23 380 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 HERC2P3Q9BVR0 1158 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 PCDH10Q9P2E7 1040 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 ZNF212Q9UDV6 495 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 MAGEB16A2A368 324 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 USP1O94782 785 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 PEX11BO96011 259 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 LAG3P18627 525 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 CNTFP26441 200 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 DNAJC3Q13217 504 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 NAB1Q13506 487 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 SMAD1Q15797 465 aaKnown RBP19.5■□□□□ 0.71
BRF1-215ENST00000549655 ANKRD20A4Q4UJ75 823 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 HECTD3Q5T447 861 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 YTHDF3Q7Z739 585 aaKnown RBP19.5■□□□□ 0.71
BRF1-215ENST00000549655 CMTR2Q8IYT2 770 aaKnown RBP19.5■□□□□ 0.71
BRF1-215ENST00000549655 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.5■□□□□ 0.71
BRF1-215ENST00000549655 IPMKQ8NFU5 416 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 LRRC8CQ8TDW0 803 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 SPOCK2Q92563 424 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 ARMC5Q96C12 935 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 MYEOVQ96EZ4 313 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 TBL1YQ9BQ87 522 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 SPG21Q9NZD8 308 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 ZFATQ9P243 1243 aa19.5■□□□□ 0.71
BRF1-215ENST00000549655 FAM237BA0A1B0GVD1 139 aa19.49■□□□□ 0.71
BRF1-215ENST00000549655 J3KR12 359 aa19.49■□□□□ 0.71
BRF1-215ENST00000549655 COPEO14579 308 aa19.49■□□□□ 0.71
BRF1-215ENST00000549655 GJB5O95377 273 aa19.49■□□□□ 0.71
BRF1-215ENST00000549655 OAS1P00973 400 aaKnown RBP19.49■□□□□ 0.71
BRF1-215ENST00000549655 TACR2P21452 398 aa19.49■□□□□ 0.71
BRF1-215ENST00000549655 ALDH1A3P47895 512 aa19.49■□□□□ 0.71
BRF1-215ENST00000549655 RENBPP51606 427 aa19.49■□□□□ 0.71
BRF1-215ENST00000549655 GEMP55040 296 aa19.49■□□□□ 0.71
BRF1-215ENST00000549655 HNRNPDQ14103 355 aaKnown RBP19.49■□□□□ 0.71
BRF1-215ENST00000549655 ITIH4Q14624 930 aa19.49■□□□□ 0.71
BRF1-215ENST00000549655 ZNF449Q6P9G9 518 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms