RNA–Protein interactions for RNA: ENST00000549457.1

NOP56P3-201, Transcript of NOP56 ribonucleoprotein pseudogene 3, humanhuman

BASIC

Gene NOP56P3, Length 385 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56P3-201ENST00000549457 RPS3AP61247 264 aaKnown RBP5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 NUCB1Q02818 461 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 VWA5B1Q5TIE3 1220 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 TMEM81Q6P7N7 255 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 RNF144BQ7Z419 303 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 NEK8Q86SG6 692 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 RHPN2Q8IUC4 686 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 EXD3Q8N9H8 876 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 SCAIQ8N9R8 606 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 C11orf65Q8NCR3 313 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 FAM110DQ8TAY7 271 aaPredicted RBP5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 CREB3L4Q8TEY5 395 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 HSPH1Q92598 858 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 REPS1Q96D71 796 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 RSRC1Q96IZ7 334 aaKnown RBP5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 DUSP26Q9BV47 211 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 USP44Q9H0E7 712 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 MUC13Q9H3R2 512 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 BRF2Q9HAW0 419 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 ENTPD7Q9NQZ7 604 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 HAUS2Q9NVX0 235 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 FBXO40Q9UH90 709 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 VPS28Q9UK41 221 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 PACSIN3Q9UKS6 424 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 SLC8A2Q9UPR5 921 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 PSAT1Q9Y617 370 aa5.66□□□□□ -1.5
NOP56P3-201ENST00000549457 NPIPB15A6NHN6 443 aaPredicted RBP5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 KCNJ18B7U540 433 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 AP3D1O14617 1153 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 CEP104O60308 925 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 DOK2O60496 412 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 PTP4A3O75365 173 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 ADRB1P08588 477 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 SPARCP09486 303 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 GPD1P21695 349 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 IDUAP35475 653 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 MLH1P40692 756 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 RHAGQ02094 409 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 DCTN2Q13561 401 aaKnown RBP5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 SUMO4Q6EEV6 95 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 NAPEPLDQ6IQ20 393 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 CPXM2Q8N436 756 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 DNAAF1Q8NEP3 725 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 KCNG4Q8TDN1 519 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 PIGKQ92643 395 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 FRG2BQ96QU4 278 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 ZNF347Q96SE7 839 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 ZNF747Q9BV97 191 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 IFT27Q9BW83 186 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 CPNE5Q9HCH3 593 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 Q9N2J8 555 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 PEMTQ9UBM1 199 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 HDAC6Q9UBN7 1215 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 LYVE1Q9Y5Y7 322 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 WNT6Q9Y6F9 365 aa5.65□□□□□ -1.5
NOP56P3-201ENST00000549457 TCERG1O14776 1098 aaKnown RBP5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 SOX2P48431 317 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 BLKP51451 505 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 CUL4AQ13619 759 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 C5orf22Q49AR2 442 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 ARL13AQ5H913 290 aaPredicted RBP5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 FAM171A1Q5VUB5 890 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 SETD9Q8NE22 299 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 LARP4BQ92615 738 aaKnown RBP5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 SARAFQ96BY9 339 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 ERP27Q96DN0 273 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 TEFMQ96QE5 360 aaKnown RBP5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 FCRL5Q96RD9 977 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 GATA5Q9BWX5 397 aaPredicted RBP5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 GHITMQ9H3K2 345 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 IPO11Q9UI26 975 aaKnown RBP5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 CLDN16Q9Y5I7 305 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 RPS6KL1Q9Y6S9 549 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 PIAS3Q9Y6X2 628 aa5.64□□□□□ -1.51
NOP56P3-201ENST00000549457 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 A0A1W2PQM1 296 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 C17orf100A8MU93 164 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 KIF1CO43896 1103 aaKnown RBP5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 TMCC2O75069 709 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 TSPAN9O75954 239 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 CBX6O95503 412 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 FCGR2AP12318 317 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 NFKBIAP25963 317 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 CHRNA5P30532 468 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 FMO4P31512 558 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 HOXD13P35453 343 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 CPOXP36551 454 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 PLA2G5P39877 138 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 RGS2P41220 211 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 CPA2P48052 419 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 CYP2J2P51589 502 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 GOLGA8DPQ0D2H9 430 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 MTA1Q13330 715 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 GALNT3Q14435 633 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 SLC9B1Q4ZJI4 515 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 AWAT1Q58HT5 328 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 RILPL1Q5EBL4 403 aa5.63□□□□□ -1.51
NOP56P3-201ENST00000549457 UBAP2Q5T6F2 1119 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms