RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 KLHL8Q9P2G9 620 aaPredicted RBP11.33□□□□□ -0.6
LINC00661-204ENST00000549354 ADAMTS6Q9UKP5 1117 aa11.33□□□□□ -0.6
LINC00661-204ENST00000549354 APOBEC2Q9Y235 224 aaKnown RBP11.33□□□□□ -0.6
LINC00661-204ENST00000549354 CAPN14A8MX76 684 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 HNRNPCL1O60812 293 aaKnown RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 APOEP02649 317 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 PTPN9P43378 593 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 LAMB3Q13751 1172 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 LGSNQ5TDP6 509 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 LHX8Q68G74 356 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 ZNF280DQ6N043 979 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 SATL1Q86VE3 508 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 CHSY1Q86X52 802 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 OR52K1Q8NGK4 314 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 CD99L2Q8TCZ2 262 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 SLC2A14Q8TDB8 520 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 ANKRD27Q96NW4 1050 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 RNF157Q96PX1 679 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 RHOBTB2Q9BYZ6 727 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 USP29Q9HBJ7 922 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 CYP4F12Q9HCS2 524 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 KCNK4Q9NYG8 393 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 PCDHGB4Q9UN71 923 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 PCDHGB5Q9Y5G0 923 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 CAPN8A6NHC0 703 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 ZNF487B1APH4 448 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 STX16-NPEPL1H3BU86 382 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 MOCS2O96007 188 aaPredicted RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 CTSHP09668 335 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 ACTR3P61158 418 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 IRF9Q00978 393 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 NOMO1Q15155 1222 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 PDCD2Q16342 344 aaPredicted RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 CNPY1Q3B7I2 92 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 C11orf91Q3C1V1 193 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 MMEL1Q495T6 779 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 RWDD4Q6NW29 188 aaKnown RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 WDR75Q8IWA0 830 aaKnown RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 MAP7D3Q8IWC1 876 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 B3GALNT2Q8NCR0 500 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 KCTD13Q8WZ19 329 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 ZNF669Q96BR6 464 aaPredicted RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 GAD1Q99259 594 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 UBE2OQ9C0C9 1292 aaKnown RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 KNL1Q8NG31 2342 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 TTC3P53804 2025 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 FRMPD3Q5JV73 1810 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 A0A088AWK7 358 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 XPO1O14980 1071 aaKnown RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 BUD23O43709 281 aaKnown RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 TSPAN3O60637 253 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 ENO3P13929 434 aaPredicted RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 RAG1P15918 1043 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 FGFR3P22607 806 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 EPHA3P29320 983 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 CD52P31358 61 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 KRT72Q14CN4 511 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 UPP1Q16831 310 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 PPM1LQ5SGD2 360 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 IYDQ6PHW0 289 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 PAQR9Q6ZVX9 377 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 ZNF598Q86UK7 904 aaKnown RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 RYBPQ8N488 228 aaPredicted RBP11.32□□□□□ -0.6
LINC00661-204ENST00000549354 ACVR1CQ8NER5 493 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 GDPD5Q8WTR4 605 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 ZNF778Q96MU6 729 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 DUSP16Q9BY84 665 aa11.32□□□□□ -0.6
LINC00661-204ENST00000549354 PYGLP06737 847 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 BPGMP07738 259 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 PTPN1P18031 435 aaKnown RBP11.31□□□□□ -0.6
LINC00661-204ENST00000549354 STIP1P31948 543 aaKnown RBP11.31□□□□□ -0.6
LINC00661-204ENST00000549354 SLC1A6P48664 564 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 AFF1P51825 1210 aaKnown RBP11.31□□□□□ -0.6
LINC00661-204ENST00000549354 COLGALT1Q8NBJ5 622 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 MFSD3Q96ES6 412 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 TMA16Q96EY4 203 aaKnown RBP11.31□□□□□ -0.6
LINC00661-204ENST00000549354 SENP8Q96LD8 212 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 TBCBQ99426 244 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 EPAS1Q99814 870 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 IL1RL2Q9HB29 575 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 PCDH18Q9HCL0 1135 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 SSU72Q9NP77 194 aaKnown RBP11.31□□□□□ -0.6
LINC00661-204ENST00000549354 DDX18Q9NVP1 670 aaKnown RBP11.31□□□□□ -0.6
LINC00661-204ENST00000549354 APPL1Q9UKG1 709 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 SLC39A10Q9ULF5 831 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 SOX13Q9UN79 622 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 AP4E1Q9UPM8 1137 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 MYO7AQ13402 2215 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 TTC24A2A3L6 582 aaPredicted RBP11.31□□□□□ -0.6
LINC00661-204ENST00000549354 TGDSO95455 350 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 TKTP29401 623 aaKnown RBP11.31□□□□□ -0.6
LINC00661-204ENST00000549354 LHX1P48742 406 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 PRMT2P55345 433 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 MED21Q13503 144 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 TRMT5Q32P41 509 aaKnown RBP11.31□□□□□ -0.6
LINC00661-204ENST00000549354 EFHC1Q5JVL4 640 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 CD300LGQ6UXG3 332 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 FAM43BQ6ZT52 329 aaPredicted RBP11.31□□□□□ -0.6
LINC00661-204ENST00000549354 OR6Y1Q8NGX8 325 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms