RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	CSK	P41240	450 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	CLCN6	P51797	869 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	PLK1	P53350	603 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	GDF10	P55107	478 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	TNK2	Q07912	1038 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	IL10RB	Q08334	325 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	LMAN2	Q12907	356 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	NR1H3	Q13133	447 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	SLC12A1	Q13621	1099 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	PTK6	Q13882	451 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	PPP1R7	Q15435	360 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	GAB4	Q2WGN9	574 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	ASTL	Q6HA08	431 aa	Predicted RBP	12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	TIGD7	Q6NT04	549 aa	Predicted RBP	12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	ZNF354C	Q86Y25	554 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	CCDC89	Q8N998	374 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	MYRIP	Q8NFW9	859 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	UBXN4	Q92575	508 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	NXPE3	Q969Y0	559 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	ALG14	Q96F25	216 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	SPON2	Q9BUD6	331 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	ACE2	Q9BYF1	805 aa	Predicted RBP	12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	SP110	Q9HB58	689 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	PCDH9	Q9HC56	1237 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	ATP13A1	Q9HD20	1204 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	FBXO10	Q9UK96	956 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	NEU2	Q9Y3R4	380 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205	OR51B4	Q9Y5P0	310 aa		12.5	□□□□□ -0.41
ERBB3-208	ENST00000549205		A0A0C4DFX4	3053 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	C5orf60	A6NFR6	353 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	OTOL1	A6NHN0	477 aa	Predicted RBP	12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205		J3KR12	359 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	KCNK1	O00180	336 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	ARNTL	O00327	626 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	MATN3	O15232	486 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	KDELR3	O43731	214 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	GCAT	O75600	419 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	HEXIM1	O94992	359 aa	Known RBP	12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	IFNB1	P01574	187 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	KRT14	P02533	472 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	RHOXF2B	P0C7M4	288 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	HLA-F	P30511	346 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	CD70	P32970	193 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	IFI35	P80217	286 aa	Predicted RBP	12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	SLC7A5	Q01650	507 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	TFF2	Q03403	129 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	WASHC5	Q12768	1159 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	RUNX3	Q13761	415 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	ITPRIPL2	Q3MIP1	535 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	IL31	Q6EBC2	164 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	ETFBKMT	Q8IXQ9	262 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	DCAF4L2	Q8NA75	395 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	GLIS1	Q8NBF1	620 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	MAML1	Q92585	1016 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	XPO6	Q96QU8	1125 aa	Known RBP	12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	RHOXF2	Q9BQY4	288 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	ERP44	Q9BS26	406 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	TRIM51	Q9BSJ1	452 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	BRD9	Q9H8M2	597 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	ABCB8	Q9NUT2	735 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	SEPT10	Q9P0V9	454 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	IGSF9	Q9P2J2	1179 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	LIMD1	Q9UGP4	676 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	GGA2	Q9UJY4	613 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	VPS28	Q9UK41	221 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205	HPCAL4	Q9UM19	191 aa		12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205		V9GYY5	206 aa	Predicted RBP	12.49	□□□□□ -0.41
ERBB3-208	ENST00000549205		A0A0A0MRY4	1105 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	TARSL2	A2RTX5	802 aa	Known RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	CBX4	O00257	560 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	CTIF	O43310	598 aa	Known RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	OPHN1	O60890	802 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	ZMPSTE24	O75844	475 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	PEX11B	O96011	259 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	CISD3	P0C7P0	127 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	PABPC1	P11940	636 aa	Known RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	CCNB1	P14635	433 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	ETS1	P14921	441 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	GLDC	P23378	1020 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	PTPN3	P26045	913 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	RPL22	P35268	128 aa	Known RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	NRL	P54845	237 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	ZBTB17	Q13105	803 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	DMC1	Q14565	340 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	TRIP13	Q15645	432 aa	Predicted RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	KCTD19	Q17RG1	926 aa	Predicted RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	AAK1	Q2M2I8	961 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	ERCC6L	Q2NKX8	1250 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	P3H1	Q32P28	736 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	PLEKHG6	Q3KR16	790 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	TMCO4	Q5TGY1	634 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	DUPD1	Q68J44	220 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	PRUNE1	Q86TP1	453 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	APCDD1	Q8J025	514 aa		12.48	□□□□□ -0.41
ERBB3-208	ENST00000549205	NAT16	Q8N8M0	369 aa		12.48	□□□□□ -0.41

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