RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 THAP10Q9P2Z0 257 aaPredicted RBP21.57■■□□□ 1.04
CACNB3-210ENST00000548874 KDELR3O43731 214 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 TGM2P21980 687 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 GLDCP23378 1020 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 VASPP50552 380 aaPredicted RBP21.56■■□□□ 1.04
CACNB3-210ENST00000548874 DYNLT1P63172 113 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 MRPS21P82921 87 aaKnown RBP21.56■■□□□ 1.04
CACNB3-210ENST00000548874 ARF5P84085 180 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 ECT2LQ008S8 904 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 GALNT2Q10471 571 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 KLF1Q13351 362 aaPredicted RBP21.56■■□□□ 1.04
CACNB3-210ENST00000548874 EGFLAMQ63HQ2 1017 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 CCDC26Q8TAB7 109 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 USP33Q8TEY7 942 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 MYO19Q96H55 970 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 EPHX3Q9H6B9 360 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 LMAN1LQ9HAT1 526 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 ERVW-1Q9UQF0 538 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 RAD54BQ9Y620 910 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 NUP205Q92621 2012 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 TRIOO75962 3097 aa21.56■■□□□ 1.04
CACNB3-210ENST00000548874 CBX4O00257 560 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 DFFAO00273 331 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 NCAM2O15394 837 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 RNF40O75150 1001 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 TJP3O95049 919 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 SEC13P55735 322 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 ENPP2Q13822 863 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 PAPD7Q5XG87 772 aaKnown RBP21.55■■□□□ 1.04
CACNB3-210ENST00000548874 NPNTQ6UXI9 565 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 ZSCAN30Q86W11 494 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 LRRC49Q8IUZ0 686 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 ZNF513Q8N8E2 541 aaPredicted RBP21.55■■□□□ 1.04
CACNB3-210ENST00000548874 KDM1BQ8NB78 822 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 FLCNQ8NFG4 579 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 CYB5D2Q8WUJ1 264 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 OLFM3Q96PB7 478 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 NAPGQ99747 312 aaPredicted RBP21.55■■□□□ 1.04
CACNB3-210ENST00000548874 PDFQ9HBH1 243 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 SNX12Q9UMY4 172 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 HS3ST2Q9Y278 367 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 SIT1Q9Y3P8 196 aa21.55■■□□□ 1.04
CACNB3-210ENST00000548874 NYNRINQ9P2P1 1898 aaKnown RBP21.55■■□□□ 1.04
CACNB3-210ENST00000548874 A0A0C4DFX4 3053 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 APOC4-APOC2K7ER74 178 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 STK25O00506 426 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 NPC1O15118 1278 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 PRAMEF11O60813 436 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 CD160O95971 181 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 APOC2P02655 101 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 SRPRAP08240 638 aaKnown RBP21.54■■□□□ 1.04
CACNB3-210ENST00000548874 PECAM1P16284 738 aaPredicted RBP21.54■■□□□ 1.04
CACNB3-210ENST00000548874 CXCR5P32302 372 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 RPS9P46781 194 aaKnown RBP21.54■■□□□ 1.04
CACNB3-210ENST00000548874 NR2C2P49116 596 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 ZNF234Q14588 700 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 E2F5Q15329 346 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 RETSATQ6NUM9 610 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 ARHGAP36Q6ZRI8 547 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 Q6ZS52 159 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 BMP8AQ7Z5Y6 402 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 SLC13A5Q86YT5 568 aaPredicted RBP21.54■■□□□ 1.04
CACNB3-210ENST00000548874 IL17RCQ8NAC3 791 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 PBKQ96KB5 322 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 OSBPL9Q96SU4 736 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 ACOX2Q99424 681 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 IPO11Q9UI26 975 aaKnown RBP21.54■■□□□ 1.04
CACNB3-210ENST00000548874 HPCAL4Q9UM19 191 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 HEY1Q9Y5J3 304 aa21.54■■□□□ 1.04
CACNB3-210ENST00000548874 CTAGE9A4FU28 777 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 ZSCAN5CA6NGD5 496 aaPredicted RBP21.53■■□□□ 1.04
CACNB3-210ENST00000548874 MAFKO60675 156 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 MAP3K6O95382 1288 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 PRLRP16471 622 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 AOC1P19801 751 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 MX2P20592 715 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 TIE1P35590 1138 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 DEKP35659 375 aaKnown RBP21.53■■□□□ 1.04
CACNB3-210ENST00000548874 GARSP41250 739 aaKnown RBP21.53■■□□□ 1.04
CACNB3-210ENST00000548874 STK19P49842 368 aaPredicted RBP21.53■■□□□ 1.04
CACNB3-210ENST00000548874 SLC20A2Q08357 652 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 HSF5Q4G112 596 aaPredicted RBP21.53■■□□□ 1.04
CACNB3-210ENST00000548874 C2orf27AQ580R0 203 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 RASGEF1CQ8N431 466 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 ATPAF2Q8N5M1 289 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 CCDC33Q8N5R6 958 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 HDAC11Q96DB2 347 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 TSGA13Q96PP4 275 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 CHRDQ9H2X0 955 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 TMEM245Q9H330 911 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 DLGAP2Q9P1A6 1054 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 SAE1Q9UBE0 346 aaPredicted RBP21.53■■□□□ 1.04
CACNB3-210ENST00000548874 SLC25A13Q9UJS0 675 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 PLA2G4CQ9UP65 541 aa21.53■■□□□ 1.04
CACNB3-210ENST00000548874 TCRBV7S2A1N4TA0A589 114 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 CHURC1-FNTBB4DL54 471 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 J3KR12 359 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 CES2O00748 559 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 MT-CO1P00395 513 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 IL12RB1P42701 662 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms