RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 PPM1HQ9ULR3 514 aa9.89□□□□□ -0.83
GCN1-205ENST00000548821 HS3ST4Q9Y661 456 aa9.89□□□□□ -0.83
GCN1-205ENST00000548821 CACNA1BQ00975 2339 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 GOLGA8CPA6NN73 597 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 DRGXA6NNA5 263 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 ENC1O14682 589 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 LATO43561 262 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 GRAP2O75791 330 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 UCHL3P15374 230 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 CHRNA3P32297 505 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 ANP32AP39687 249 aaKnown RBP9.88□□□□□ -0.83
GCN1-205ENST00000548821 CTSOP43234 321 aaPredicted RBP9.88□□□□□ -0.83
GCN1-205ENST00000548821 DUSP3P51452 185 aaPredicted RBP9.88□□□□□ -0.83
GCN1-205ENST00000548821 FAM193AP78312 1265 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 POLD3Q15054 466 aaPredicted RBP9.88□□□□□ -0.83
GCN1-205ENST00000548821 TAF5Q15542 800 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 SMAD1Q15797 465 aaKnown RBP9.88□□□□□ -0.83
GCN1-205ENST00000548821 TCP11X2Q5H9J9 407 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 GJB7Q6PEY0 223 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 CACTIN-AS1Q8N1I8 211 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 PNPLA1Q8N8W4 532 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 DCAF4L2Q8NA75 395 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 FRS2Q8WU20 508 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 NT5C3BQ969T7 300 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 RAB7BQ96AH8 199 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 IFT43Q96FT9 208 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 CNDP2Q96KP4 475 aaKnown RBP9.88□□□□□ -0.83
GCN1-205ENST00000548821 SLC6A18Q96N87 628 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 GBP4Q96PP9 640 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 TMEM121BQ9BXQ6 578 aaPredicted RBP9.88□□□□□ -0.83
GCN1-205ENST00000548821 ZYG11BQ9C0D3 744 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 USP29Q9HBJ7 922 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 PPARGC1AQ9UBK2 798 aaKnown RBP9.88□□□□□ -0.83
GCN1-205ENST00000548821 CYTH4Q9UIA0 394 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 XPO7Q9UIA9 1087 aaKnown RBP9.88□□□□□ -0.83
GCN1-205ENST00000548821 LAMA1P25391 3075 aa9.88□□□□□ -0.83
GCN1-205ENST00000548821 TNRC6BQ9UPQ9 1833 aaKnown RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 ZSCAN5CA6NGD5 496 aaPredicted RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 EIF4E1BA6NMX2 242 aaKnown RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 KPNA3O00505 521 aaPredicted RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 BNIP3LO60238 219 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 SRGAP2O75044 1071 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 RFPL3O75679 317 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 DKK1O94907 266 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 TOP3BO95985 862 aaKnown RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 CALCAP01258 141 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 ERBB2P04626 1255 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 ATXN1LP0C7T5 689 aaKnown RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 CDK11BP21127 795 aaKnown RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 SDC4P31431 198 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 STAT1P42224 750 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 STK19P49842 368 aaPredicted RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 NXPH1P58417 271 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 RPS21P63220 83 aaKnown RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 BNC1Q01954 994 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 SGCGQ13326 291 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 CXorf57Q6NSI4 855 aaKnown RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 KIAA1161Q6NSJ0 714 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 FBXL19Q6PCT2 694 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 SASS6Q6UVJ0 657 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 LRRC69Q6ZNQ3 347 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 SLCO6A1Q86UG4 719 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 IRF2BP1Q8IU81 584 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 AADATQ8N5Z0 425 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 PCDH20Q8N6Y1 951 aaKnown RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 ENOX1Q8TC92 643 aaKnown RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 SAP25Q8TEE9 199 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 CASKIN2Q8WXE0 1202 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 FAM131CQ96AQ9 280 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 ISG20Q96AZ6 181 aaKnown RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 NXPE2Q96DL1 559 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 PCMTD1Q96MG8 357 aaPredicted RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 SPON2Q9BUD6 331 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 DUSP23Q9BVJ7 150 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 C1QTNF7Q9BXJ2 289 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 HDAC8Q9BY41 377 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 NAT10Q9H0A0 1025 aaKnown RBP9.87□□□□□ -0.83
GCN1-205ENST00000548821 MTG2Q9H4K7 406 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 ACP6Q9NPH0 428 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 IL36AQ9UHA7 158 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 LHX6Q9UPM6 363 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 HS3ST3A1Q9Y663 406 aa9.87□□□□□ -0.83
GCN1-205ENST00000548821 CEP192Q8TEP8 1941 aa9.86□□□□□ -0.83
GCN1-205ENST00000548821 H3BM21 787 aa9.86□□□□□ -0.83
GCN1-205ENST00000548821 CBX4O00257 560 aa9.86□□□□□ -0.83
GCN1-205ENST00000548821 RRP8O43159 456 aaKnown RBP9.86□□□□□ -0.83
GCN1-205ENST00000548821 PCDH8O95206 1070 aa9.86□□□□□ -0.83
GCN1-205ENST00000548821 ADCY5O95622 1261 aa9.86□□□□□ -0.83
GCN1-205ENST00000548821 CALB1P05937 261 aa9.86□□□□□ -0.83
GCN1-205ENST00000548821 SRCP12931 536 aa9.86□□□□□ -0.83
GCN1-205ENST00000548821 CKMT2P17540 419 aa9.86□□□□□ -0.83
GCN1-205ENST00000548821 HNRNPA2B1P22626 353 aaKnown RBP9.86□□□□□ -0.83
GCN1-205ENST00000548821 EPHA8P29322 1005 aaPredicted RBP9.86□□□□□ -0.83
GCN1-205ENST00000548821 NSFP46459 744 aaKnown RBP9.86□□□□□ -0.83
GCN1-205ENST00000548821 MAPKAPK2P49137 400 aa9.86□□□□□ -0.83
GCN1-205ENST00000548821 AIF1P55008 147 aa9.86□□□□□ -0.83
GCN1-205ENST00000548821 NRG1Q02297 640 aaPredicted RBP9.86□□□□□ -0.83
GCN1-205ENST00000548821 CNTN1Q12860 1018 aa9.86□□□□□ -0.83
GCN1-205ENST00000548821 PTPN20Q4JDL3 420 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms