RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 SPON2Q9BUD6 331 aa29.41■■■□□ 2.3
BRF1-213ENST00000548421 VPS28Q9UK41 221 aa29.41■■■□□ 2.3
BRF1-213ENST00000548421 HPCAL4Q9UM19 191 aa29.41■■■□□ 2.3
BRF1-213ENST00000548421 NEU2Q9Y3R4 380 aa29.41■■■□□ 2.3
BRF1-213ENST00000548421 OR51B4Q9Y5P0 310 aa29.41■■■□□ 2.3
BRF1-213ENST00000548421 OTOL1A6NHN0 477 aaPredicted RBP29.4■■■□□ 2.3
BRF1-213ENST00000548421 RHOXF2BP0C7M4 288 aa29.4■■■□□ 2.3
BRF1-213ENST00000548421 CLCN6P51797 869 aa29.4■■■□□ 2.3
BRF1-213ENST00000548421 IL10RBQ08334 325 aa29.4■■■□□ 2.3
BRF1-213ENST00000548421 FATE1Q969F0 183 aa29.4■■■□□ 2.3
BRF1-213ENST00000548421 LMLNQ96KR4 655 aa29.4■■■□□ 2.3
BRF1-213ENST00000548421 RHOXF2Q9BQY4 288 aa29.4■■■□□ 2.3
BRF1-213ENST00000548421 PCDH9Q9HC56 1237 aa29.4■■■□□ 2.3
BRF1-213ENST00000548421 ABCB8Q9NUT2 735 aa29.4■■■□□ 2.3
BRF1-213ENST00000548421 SEPT10Q9P0V9 454 aa29.4■■■□□ 2.3
BRF1-213ENST00000548421 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.4■■■□□ 2.3
BRF1-213ENST00000548421 V9GYY5 206 aaPredicted RBP29.4■■■□□ 2.3
BRF1-213ENST00000548421 KIAA1549LQ6ZVL6 1849 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 KCNK1O00180 336 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 MATN3O15232 486 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 KDELR3O43731 214 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 STK10O94804 968 aaKnown RBP29.39■■■□□ 2.3
BRF1-213ENST00000548421 KRT14P02533 472 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 HLA-FP30511 346 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 CD70P32970 193 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 TFF2Q03403 129 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 PTK6Q13882 451 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 NAT16Q8N8M0 369 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 MYRIPQ8NFW9 859 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 ALG14Q96F25 216 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 TRIM51Q9BSJ1 452 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 BRD9Q9H8M2 597 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 FBXO10Q9UK96 956 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 TICRRQ7Z2Z1 1910 aa29.39■■■□□ 2.3
BRF1-213ENST00000548421 MIA3Q5JRA6 1907 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 J3KR12 359 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 ARNTLO00327 626 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 PRAMEF11O60813 436 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 HEXIM1O94992 359 aaKnown RBP29.38■■■□□ 2.29
BRF1-213ENST00000548421 SLC7A5Q01650 507 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 P3H1Q32P28 736 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 DCAF4L2Q8NA75 395 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 GLIS1Q8NBF1 620 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 CCHCR1Q8TD31 782 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 RAB17Q9H0T7 212 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 KCNK12Q9HB15 430 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 DNAJC17Q9NVM6 304 aaKnown RBP29.38■■■□□ 2.29
BRF1-213ENST00000548421 GTSE1Q9NYZ3 720 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 IGSF9Q9P2J2 1179 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 LIMD1Q9UGP4 676 aa29.38■■■□□ 2.29
BRF1-213ENST00000548421 UTP11Q9Y3A2 253 aaKnown RBP29.38■■■□□ 2.29
BRF1-213ENST00000548421 C5orf60A6NFR6 353 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 RNF103O00237 685 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 ACTN2P35609 894 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 NUMBP49757 651 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 PLK1P53350 603 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 WASHC5Q12768 1159 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 TRIP13Q15645 432 aaPredicted RBP29.37■■■□□ 2.29
BRF1-213ENST00000548421 KCTD19Q17RG1 926 aaPredicted RBP29.37■■■□□ 2.29
BRF1-213ENST00000548421 AAK1Q2M2I8 961 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 GAB4Q2WGN9 574 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 PLEKHG6Q3KR16 790 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 ASTLQ6HA08 431 aaPredicted RBP29.37■■■□□ 2.29
BRF1-213ENST00000548421 ETFBKMTQ8IXQ9 262 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 NSMCE1Q8WV22 266 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 MAML1Q92585 1016 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 VAT1Q99536 393 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 C2orf49Q9BVC5 232 aaPredicted RBP29.37■■■□□ 2.29
BRF1-213ENST00000548421 PDFQ9HBH1 243 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 GGA2Q9UJY4 613 aa29.37■■■□□ 2.29
BRF1-213ENST00000548421 CBX4O00257 560 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 GCATO75600 419 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 PABPC1P11940 636 aaKnown RBP29.36■■■□□ 2.29
BRF1-213ENST00000548421 CCNB1P14635 433 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 ETS1P14921 441 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 IL9P15248 144 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 PTPN3P26045 913 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 NRLP54845 237 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 IFI35P80217 286 aaPredicted RBP29.36■■■□□ 2.29
BRF1-213ENST00000548421 ERCC6LQ2NKX8 1250 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 ITPRIPL2Q3MIP1 535 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 PRUNE1Q86TP1 453 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 APCDD1Q8J025 514 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.36■■■□□ 2.29
BRF1-213ENST00000548421 ZNF599Q96NL3 588 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 ERP44Q9BS26 406 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 PRDM6Q9NQX0 595 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 ASIC3Q9UHC3 531 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 DMGDHQ9UI17 866 aaKnown RBP29.36■■■□□ 2.29
BRF1-213ENST00000548421 A0A0A0MRY4 1105 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 PEX11BO96011 259 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 ZSCAN5DPP0CG00 497 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 GLDCP23378 1020 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 DGKGP49619 791 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 ZBTB17Q13105 803 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 HNRNPDQ14103 355 aaKnown RBP29.36■■■□□ 2.29
BRF1-213ENST00000548421 PITRM1Q5JRX3 1037 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 C12orf40Q86WS4 652 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 ACDQ96AP0 544 aa29.36■■■□□ 2.29
BRF1-213ENST00000548421 SPATA13Q96N96 652 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms