RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 DSC3Q14574 896 aa15.83■□□□□ 0.12
BRF1-212ENST00000547562 MAPRE1Q15691 268 aaKnown RBP15.83■□□□□ 0.12
BRF1-212ENST00000547562 ACSBG2Q5FVE4 666 aa15.83■□□□□ 0.12
BRF1-212ENST00000547562 CLEC14AQ86T13 490 aa15.83■□□□□ 0.12
BRF1-212ENST00000547562 LINC00523Q86TU6 105 aa15.83■□□□□ 0.12
BRF1-212ENST00000547562 KLHDC8BQ8IXV7 354 aa15.83■□□□□ 0.12
BRF1-212ENST00000547562 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.83■□□□□ 0.12
BRF1-212ENST00000547562 OR6Y1Q8NGX8 325 aa15.83■□□□□ 0.12
BRF1-212ENST00000547562 CFAP61Q8NHU2 1237 aa15.83■□□□□ 0.12
BRF1-212ENST00000547562 TRIB2Q92519 343 aa15.83■□□□□ 0.12
BRF1-212ENST00000547562 SIK2Q9H0K1 926 aa15.83■□□□□ 0.12
BRF1-212ENST00000547562 MYO16Q9Y6X6 1858 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 DFFAO00273 331 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 PSMD3O43242 534 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 AOC1P19801 751 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 CCNCP24863 283 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 DNAJB2P25686 324 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 ABCG1P45844 678 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 PTDSS1P48651 473 aaKnown RBP15.82■□□□□ 0.12
BRF1-212ENST00000547562 HARS2P49590 506 aaKnown RBP15.82■□□□□ 0.12
BRF1-212ENST00000547562 RAP1GDS1P52306 607 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 CRHR2Q13324 411 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 ITGA9Q13797 1035 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 OTOP3Q7RTS5 596 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 TNS4Q8IZW8 715 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 URGCPQ8TCY9 931 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 USP33Q8TEY7 942 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 HAPLN3Q96S86 360 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 FAM96AQ9H5X1 160 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 CAB39LQ9H9S4 337 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 IARS2Q9NSE4 1012 aaKnown RBP15.82■□□□□ 0.12
BRF1-212ENST00000547562 APOBEC2Q9Y235 224 aaKnown RBP15.82■□□□□ 0.12
BRF1-212ENST00000547562 INPP5FQ9Y2H2 1132 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 LRRC42Q9Y546 428 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 CEP350Q5VT06 3117 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 PAX3P23760 479 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 NMBRP28336 390 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 DLG2Q15700 870 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 BRMS1LQ5PSV4 323 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 RABGAP1LQ5R372 815 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 MFSD14CQ5VZR4 134 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 ARHGAP36Q6ZRI8 547 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 MAVSQ7Z434 540 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 THEM5Q8N1Q8 247 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 WDR60Q8WVS4 1066 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 MYCBPQ99417 103 aaPredicted RBP15.82■□□□□ 0.12
BRF1-212ENST00000547562 ADAM2Q99965 735 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 KIFC1Q9BW19 673 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 ABCC13Q9NSE7 274 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 PNPOQ9NVS9 261 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 DNAJC28Q9NX36 388 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 PLA2G4CQ9UP65 541 aa15.82■□□□□ 0.12
BRF1-212ENST00000547562 MYLKQ15746 1914 aa15.81■□□□□ 0.12
BRF1-212ENST00000547562 ITGB1P05556 798 aa15.81■□□□□ 0.12
BRF1-212ENST00000547562 ALOX15P16050 662 aaPredicted RBP15.81■□□□□ 0.12
BRF1-212ENST00000547562 CLNS1AP54105 237 aaKnown RBP15.81■□□□□ 0.12
BRF1-212ENST00000547562 IRF9Q00978 393 aa15.81■□□□□ 0.12
BRF1-212ENST00000547562 TSPY1Q01534 308 aa15.81■□□□□ 0.12
BRF1-212ENST00000547562 LPIN1Q14693 890 aa15.81■□□□□ 0.12
BRF1-212ENST00000547562 TAF11Q15544 211 aa15.81■□□□□ 0.12
BRF1-212ENST00000547562 ARHGAP12Q8IWW6 846 aa15.81■□□□□ 0.12
BRF1-212ENST00000547562 ATPAF2Q8N5M1 289 aa15.81■□□□□ 0.12
BRF1-212ENST00000547562 MAB21L3Q8N8X9 362 aa15.81■□□□□ 0.12
BRF1-212ENST00000547562 VPS39Q96JC1 886 aa15.81■□□□□ 0.12
BRF1-212ENST00000547562 UROC1Q96N76 676 aa15.81■□□□□ 0.12
BRF1-212ENST00000547562 AAR2Q9Y312 384 aaKnown RBP15.81■□□□□ 0.12
BRF1-212ENST00000547562 NYNRINQ9P2P1 1898 aaKnown RBP15.81■□□□□ 0.12
BRF1-212ENST00000547562 PAGE1O75459 146 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 C2P06681 752 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 YY1P25490 414 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 HOXC13P31276 330 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 SLC5A3P53794 718 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 NKX3-2P78367 333 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 RCN1Q15293 331 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 DNAL1Q4LDG9 190 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 BTBD8Q5XKL5 378 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 PDPK2PQ6A1A2 396 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.8■□□□□ 0.12
BRF1-212ENST00000547562 SPATA22Q8NHS9 363 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 SUSD3Q96L08 255 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 C1orf21Q9H246 121 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 SMOC2Q9H3U7 446 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 STOML1Q9UBI4 398 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.8■□□□□ 0.12
BRF1-212ENST00000547562 G3V2L1 256 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 GOLGA8TH3BQL2 631 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 ZNF195O14628 629 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 FGF10O15520 208 aaPredicted RBP15.8■□□□□ 0.12
BRF1-212ENST00000547562 SEPT4O43236 478 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 ADAMTS4O75173 837 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 ASGR1P07306 291 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 CCR1P32246 355 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 HTR7P34969 479 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 IDH3AP50213 366 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 INHBEP58166 350 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 MANEALQ5VSG8 457 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 RGMBQ6NW40 437 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 GPATCH11Q8N954 259 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 ACVR1CQ8NER5 493 aa15.8■□□□□ 0.12
BRF1-212ENST00000547562 ZNF419Q96HQ0 510 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms