RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 RNF103O00237 685 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 TAF4O00268 1085 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 MCF2LO15068 1137 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 EPHB6O15197 1021 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 PCDHGA12O60330 932 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 SNAP91O60641 907 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 DKK1O94907 266 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 F9P00740 461 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 TBC1D3HP0C7X1 549 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 ZNF18P17022 549 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 CHRNB2P17787 502 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 NOMO3P69849 1222 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 SUZ12Q15022 739 aaKnown RBP13.7□□□□□ -0.22
CPSF6-204ENST00000547486 POM121L1PQ3SYA9 428 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 CDKAL1Q5VV42 579 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 NAA35Q5VZE5 725 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 TBC1D3GQ6DHY5 549 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 TBC1D3CQ6IPX1 549 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 Q6ZVU0 165 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 PHLDB2Q86SQ0 1253 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 TBC1D3Q8IZP1 549 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-204ENST00000547486 GPT2Q8TD30 523 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 EPS8L1Q8TE68 723 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 CFAP57Q96MR6 1250 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 PPP1R9BQ96SB3 815 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 CDC6Q99741 560 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 MUC3BQ9H195 1237 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 MPP6Q9NZW5 540 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 SLC25A13Q9UJS0 675 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 NOCTQ9UK39 431 aaKnown RBP13.7□□□□□ -0.22
CPSF6-204ENST00000547486 APOBEC2Q9Y235 224 aaKnown RBP13.7□□□□□ -0.22
CPSF6-204ENST00000547486 KNL1Q8NG31 2342 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 DMXL2Q8TDJ6 3036 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 FREM2Q5SZK8 3169 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 A0A1B0GTQ1 180 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 GOLGA8CPA6NN73 597 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 SMAD6O43541 496 aaKnown RBP13.69□□□□□ -0.22
CPSF6-204ENST00000547486 LATO43561 262 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 BNIP3LO60238 219 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 SRGAP2O75044 1071 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 GFPT2O94808 682 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 LSM8O95777 96 aaKnown RBP13.69□□□□□ -0.22
CPSF6-204ENST00000547486 CTSLP07711 333 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 SRCP12931 536 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 GLDCP23378 1020 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 CD38P28907 300 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 C21orf59P57076 290 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 CNTN1Q12860 1018 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 KRT31Q15323 416 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 LINGO4Q6UY18 593 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
CPSF6-204ENST00000547486 TFAP2DQ7Z6R9 452 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 MARCH9Q86YJ5 346 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 GATAD2AQ86YP4 633 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 OR2A12Q8NGT7 310 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 PIP4K2CQ8TBX8 421 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 ZCCHC14Q8WYQ9 949 aaKnown RBP13.69□□□□□ -0.22
CPSF6-204ENST00000547486 OR8D1Q8WZ84 308 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 SERAC1Q96JX3 654 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 AASDHPPTQ9NRN7 309 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 FANCLQ9NW38 375 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 ZNF212Q9UDV6 495 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 VPS51Q9UID3 782 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 HS3ST2Q9Y278 367 aa13.69□□□□□ -0.22
CPSF6-204ENST00000547486 IGLV3-10A0A075B6K4 115 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 E9PAM4 449 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 PLRG1O43660 514 aaKnown RBP13.68□□□□□ -0.22
CPSF6-204ENST00000547486 CYP1A1P04798 512 aaPredicted RBP13.68□□□□□ -0.22
CPSF6-204ENST00000547486 RHOCP08134 193 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 RRM1P23921 792 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 MAT2AP31153 395 aaKnown RBP13.68□□□□□ -0.22
CPSF6-204ENST00000547486 GRK6P43250 576 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 CCT8P50990 548 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 JAM2P57087 298 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 TAS2R38P59533 333 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 POLR2FP61218 127 aaKnown RBP13.68□□□□□ -0.22
CPSF6-204ENST00000547486 SCAPQ12770 1279 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 AGBL4Q5VU57 503 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 FAM46CQ5VWP2 391 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 LRSAM1Q6UWE0 723 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 RBM43Q6ZSC3 357 aaKnown RBP13.68□□□□□ -0.22
CPSF6-204ENST00000547486 DSG4Q86SJ6 1040 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 SETD3Q86TU7 594 aaPredicted RBP13.68□□□□□ -0.22
CPSF6-204ENST00000547486 FAM131BQ86XD5 332 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 EMC1Q8N766 993 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 ATP11CQ8NB49 1132 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 OR7D4Q8NG98 312 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 SLC30A5Q8TAD4 765 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 HAPLN3Q96S86 360 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 ELF4Q99607 663 aaPredicted RBP13.68□□□□□ -0.22
CPSF6-204ENST00000547486 MAGEB5Q9BZ81 275 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 NLRC4Q9NPP4 1024 aa13.68□□□□□ -0.22
CPSF6-204ENST00000547486 FAM207AQ9NSI2 230 aaPredicted RBP13.68□□□□□ -0.22
CPSF6-204ENST00000547486 TLR4O00206 839 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 ALOX15BO15296 676 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 SLC7A4O43246 635 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 TNFSF14O43557 240 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 DFNA5O60443 496 aa13.67□□□□□ -0.22
CPSF6-204ENST00000547486 ZNF821O75541 412 aaPredicted RBP13.67□□□□□ -0.22
CPSF6-204ENST00000547486 ENDOD1O94919 500 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms